RNA–Protein interactions for RNA: ENST00000566228.5

SNX29-205, Transcript of sorting nexin 29, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX29, Length 8,171 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-205ENST00000566228 C22orf46C9J442 243 aa9.03□□□□□ -0.96
SNX29-205ENST00000566228 ZG16O60844 167 aa9.03□□□□□ -0.96
SNX29-205ENST00000566228 MIXL1Q9H2W2 232 aa9.03□□□□□ -0.96
SNX29-205ENST00000566228 COLCA1Q6ZS62 124 aa9.02□□□□□ -0.96
SNX29-205ENST00000566228 LINC01565O15544 149 aa9.02□□□□□ -0.97
SNX29-205ENST00000566228 FOXA3P55318 350 aaPredicted RBP9.02□□□□□ -0.97
SNX29-205ENST00000566228 TNRC6CQ9HCJ0 1690 aaKnown RBP9.02□□□□□ -0.97
SNX29-205ENST00000566228 C1orf100Q5SVJ3 147 aa9.02□□□□□ -0.97
SNX29-205ENST00000566228 CSPG4Q6UVK1 2322 aa9.02□□□□□ -0.97
SNX29-205ENST00000566228 TANC2Q9HCD6 1990 aa9.02□□□□□ -0.97
SNX29-205ENST00000566228 RNASE6Q93091 150 aaKnown RBP9.02□□□□□ -0.97
SNX29-205ENST00000566228 RNF125Q96EQ8 232 aa9.02□□□□□ -0.97
SNX29-205ENST00000566228 SPATA25Q9BR10 227 aa9.02□□□□□ -0.97
SNX29-205ENST00000566228 CGB7P0DN87 165 aa9.02□□□□□ -0.97
SNX29-205ENST00000566228 UCP1P25874 307 aa9.02□□□□□ -0.97
SNX29-205ENST00000566228 C4orf48Q5BLP8 95 aa9.02□□□□□ -0.97
SNX29-205ENST00000566228 FNDC4Q9H6D8 234 aaPredicted RBP9.02□□□□□ -0.97
SNX29-205ENST00000566228 PROB1E7EW31 1015 aa9.02□□□□□ -0.97
SNX29-205ENST00000566228 RSPO3Q9BXY4 272 aaPredicted RBP9.02□□□□□ -0.97
SNX29-205ENST00000566228 IGHV1-45A0A0A0MS14 117 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 A0A1B0GTI1 187 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 LY6G5BQ8NDX9 201 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 GAGE2AQ6NT46 116 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 COLQQ9Y215 455 aaPredicted RBP9.01□□□□□ -0.97
SNX29-205ENST00000566228 NDUFB1O75438 58 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 OR9G9P0C7N8 305 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 KLF17Q5JT82 389 aaPredicted RBP9.01□□□□□ -0.97
SNX29-205ENST00000566228 LINC01555Q8NAE3 123 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 Q96M66 194 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 A0A1W2PRS3 328 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 FCN3O75636 299 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 CCL3L1P16619 93 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 SMRP1Q8NCR6 262 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 RPUSD1Q9UJJ7 312 aaKnown RBP9.01□□□□□ -0.97
SNX29-205ENST00000566228 APOC4P55056 127 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 C20orf204Q6ZNR8 217 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 Q5PR19 223 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 PRIMA1Q86XR5 153 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 TCRBV5S1A1TA0A578 114 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 hADV29S1A0JD25 119 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 H0YL77 283 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 TCRAP04437 139 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 ZNF114Q8NC26 417 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 RCC1LQ96I51 464 aaKnown RBP9.01□□□□□ -0.97
SNX29-205ENST00000566228 WFDC6Q9BQY6 131 aa9.01□□□□□ -0.97
SNX29-205ENST00000566228 TIMM21Q9BVV7 248 aa9□□□□□ -0.97
SNX29-205ENST00000566228 ZIC3O60481 467 aa9□□□□□ -0.97
SNX29-205ENST00000566228 UPK3AO75631 287 aa9□□□□□ -0.97
SNX29-205ENST00000566228 EFNB1P98172 346 aa9□□□□□ -0.97
SNX29-205ENST00000566228 SLC25A47Q6Q0C1 308 aa9□□□□□ -0.97
SNX29-205ENST00000566228 SMIM2Q9BVW6 85 aa9□□□□□ -0.97
SNX29-205ENST00000566228 HCFC1P51610 2035 aa9□□□□□ -0.97
SNX29-205ENST00000566228 NDUFS5O43920 106 aa9□□□□□ -0.97
SNX29-205ENST00000566228 IGHMP01871 453 aa9□□□□□ -0.97
SNX29-205ENST00000566228 ACP7Q6ZNF0 438 aa9□□□□□ -0.97
SNX29-205ENST00000566228 ZMAT4Q9H898 229 aa9□□□□□ -0.97
SNX29-205ENST00000566228 FUSP35637 526 aaKnown RBP eCLIP9□□□□□ -0.97
SNX29-205ENST00000566228 DEFB121Q5J5C9 76 aa9□□□□□ -0.97
SNX29-205ENST00000566228 COL9A3Q14050 684 aaPredicted RBP9□□□□□ -0.97
SNX29-205ENST00000566228 MINOS1Q5TGZ0 78 aa9□□□□□ -0.97
SNX29-205ENST00000566228 MINOS1-NBL1R4GNA1 71 aa9□□□□□ -0.97
SNX29-205ENST00000566228 TRAV13-2A0A0B4J235 113 aa9□□□□□ -0.97
SNX29-205ENST00000566228 SBF2Q86WG5 1849 aa9□□□□□ -0.97
SNX29-205ENST00000566228 RALGAPA2Q2PPJ7 1873 aa9□□□□□ -0.97
SNX29-205ENST00000566228 F12P00748 615 aaPredicted RBP8.99□□□□□ -0.97
SNX29-205ENST00000566228 CGB3P0DN86 165 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 SLC25A39Q9BZJ4 359 aaPredicted RBP8.99□□□□□ -0.97
SNX29-205ENST00000566228 MSGN1A6NI15 193 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 NMBP08949 121 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 VN1R4Q7Z5H5 301 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 COL18A1P39060 1754 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 YPEL1O60688 119 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 CT62P0C5K7 136 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 YPEL2Q96QA6 119 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 NPDC1Q9NQX5 325 aaPredicted RBP8.99□□□□□ -0.97
SNX29-205ENST00000566228 MRPS18BQ9Y676 258 aaKnown RBP8.99□□□□□ -0.97
SNX29-205ENST00000566228 MP68P56378 58 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 PDE6HQ13956 83 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 PEAR1Q5VY43 1037 aaPredicted RBP8.99□□□□□ -0.97
SNX29-205ENST00000566228 LYPD1Q8N2G4 141 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 C3orf56Q8N813 242 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 FAM181AQ8N9Y4 354 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 CGAP01215 116 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 MCRIP2Q9BUT9 160 aaKnown RBP8.99□□□□□ -0.97
SNX29-205ENST00000566228 RPRMLQ8N4K4 120 aa8.99□□□□□ -0.97
SNX29-205ENST00000566228 TAF1LQ8IZX4 1826 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 PRSS41Q7RTY9 318 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 C9orf40Q8IXQ3 194 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 PRR13Q9NZ81 148 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 A0A0J9YW62 118 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 SAP30O75446 220 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 UMODP07911 640 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 C9orf139Q6ZV77 190 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 RNF5Q99942 180 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 CCL4P13236 92 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 FUT5Q11128 374 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 KIAA0040Q15053 153 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 ZNF660Q6AZW8 331 aaPredicted RBP8.98□□□□□ -0.97
SNX29-205ENST00000566228 TSKUQ8WUA8 353 aa8.98□□□□□ -0.97
SNX29-205ENST00000566228 NCOR1P1Q9H4R4 102 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms