RNA–Protein interactions for RNA: ENST00000566016.5

SHCBP1-205, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 1 (best)

Gene SHCBP1, Length 1,482 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-205ENST00000566016 C20orf24Q9BUV8 137 aa15.94■□□□□ 0.14
SHCBP1-205ENST00000566016 C7orf66A4D0T2 115 aa15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 H3BP45 60 aa15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 GP9P14770 177 aa15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 EDN2P20800 178 aa15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 OR10J1P30954 320 aa15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 YPEL3P61236 119 aaPredicted RBP15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 IL15RAQ13261 267 aa15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 MRAPQ8TCY5 172 aa15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 PRR25Q96S07 402 aa15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 GINS3Q9BRX5 216 aa15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 ZFAND3Q9H8U3 227 aa15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 PSENENQ9NZ42 101 aa15.93■□□□□ 0.14
SHCBP1-205ENST00000566016 YIF1AO95070 293 aa15.92■□□□□ 0.14
SHCBP1-205ENST00000566016 PAX9P55771 341 aa15.92■□□□□ 0.14
SHCBP1-205ENST00000566016 GAMTQ14353 236 aa15.92■□□□□ 0.14
SHCBP1-205ENST00000566016 CD300EQ496F6 205 aaPredicted RBP15.92■□□□□ 0.14
SHCBP1-205ENST00000566016 TOMM20LQ6UXN7 152 aa15.92■□□□□ 0.14
SHCBP1-205ENST00000566016 NPIPB3Q92617 1050 aa15.92■□□□□ 0.14
SHCBP1-205ENST00000566016 ACY3Q96HD9 319 aa15.92■□□□□ 0.14
SHCBP1-205ENST00000566016 SLC35E1Q96K37 410 aa15.92■□□□□ 0.14
SHCBP1-205ENST00000566016 MLXQ9UH92 298 aa15.92■□□□□ 0.14
SHCBP1-205ENST00000566016 PUS1Q9Y606 427 aaKnown RBP eCLIP15.92■□□□□ 0.14
SHCBP1-205ENST00000566016 TMEM14EPQ6UXP3 125 aa15.91■□□□□ 0.14
SHCBP1-205ENST00000566016 PAIP2BQ9ULR5 123 aaKnown RBP15.91■□□□□ 0.14
SHCBP1-205ENST00000566016 K7EPK0 472 aa15.91■□□□□ 0.14
SHCBP1-205ENST00000566016 IGHV3OR16-8A0A075B7F1 116 aa15.9■□□□□ 0.14
SHCBP1-205ENST00000566016 SCAF4O95104 1147 aaKnown RBP15.9■□□□□ 0.14
SHCBP1-205ENST00000566016 TIGITQ495A1 244 aa15.9■□□□□ 0.14
SHCBP1-205ENST00000566016 BTNL8Q6UX41 500 aa15.9■□□□□ 0.14
SHCBP1-205ENST00000566016 LSM4Q9Y4Z0 139 aaKnown RBP15.9■□□□□ 0.14
SHCBP1-205ENST00000566016 TRAV14DV4A0A0A6YYC5 116 aa15.89■□□□□ 0.13
SHCBP1-205ENST00000566016 TRAV25A0A0B4J276 109 aa15.89■□□□□ 0.13
SHCBP1-205ENST00000566016 IGHV7-4-1A0A0J9YVY3 117 aa15.89■□□□□ 0.13
SHCBP1-205ENST00000566016 IZUMO1RA6ND01 250 aa15.89■□□□□ 0.13
SHCBP1-205ENST00000566016 PMS2P5A8MQ11 134 aa15.89■□□□□ 0.13
SHCBP1-205ENST00000566016 GOSR2O14653 212 aa15.89■□□□□ 0.13
SHCBP1-205ENST00000566016 TMEM61Q8N0U2 210 aa15.89■□□□□ 0.13
SHCBP1-205ENST00000566016 NMES1Q9C002 83 aa15.89■□□□□ 0.13
SHCBP1-205ENST00000566016 C11orf1Q9H5F2 150 aa15.89■□□□□ 0.13
SHCBP1-205ENST00000566016 SMPXQ9UHP9 88 aa15.89■□□□□ 0.13
SHCBP1-205ENST00000566016 SSNA1O43805 119 aa15.88■□□□□ 0.13
SHCBP1-205ENST00000566016 TOMM40O96008 361 aa15.88■□□□□ 0.13
SHCBP1-205ENST00000566016 PVALBP20472 110 aaPredicted RBP15.88■□□□□ 0.13
SHCBP1-205ENST00000566016 BMI1P35226 326 aa15.88■□□□□ 0.13
SHCBP1-205ENST00000566016 CYCSP99999 105 aaKnown RBP15.88■□□□□ 0.13
SHCBP1-205ENST00000566016 RGS21Q2M5E4 152 aa15.88■□□□□ 0.13
SHCBP1-205ENST00000566016 ACOT7LQ6ZUV0 252 aa15.88■□□□□ 0.13
SHCBP1-205ENST00000566016 Q8WTZ3 238 aa15.88■□□□□ 0.13
SHCBP1-205ENST00000566016 LSM5Q9Y4Y9 91 aaKnown RBP15.88■□□□□ 0.13
SHCBP1-205ENST00000566016 FNDC10F2Z333 226 aa15.87■□□□□ 0.13
SHCBP1-205ENST00000566016 L7N2F9 121 aa15.87■□□□□ 0.13
SHCBP1-205ENST00000566016 ZNF207O43670 478 aaKnown RBP15.87■□□□□ 0.13
SHCBP1-205ENST00000566016 VAMP2P63027 116 aa15.87■□□□□ 0.13
SHCBP1-205ENST00000566016 RAB32Q13637 225 aa15.87■□□□□ 0.13
SHCBP1-205ENST00000566016 THAP8Q8NA92 274 aa15.87■□□□□ 0.13
SHCBP1-205ENST00000566016 IGKV1D-37A0A075B6S9 117 aa15.86■□□□□ 0.13
SHCBP1-205ENST00000566016 ZFP92A6NM28 416 aa15.86■□□□□ 0.13
SHCBP1-205ENST00000566016 FABP1P07148 127 aa15.86■□□□□ 0.13
SHCBP1-205ENST00000566016 METTL15P1P0C7V9 234 aa15.86■□□□□ 0.13
SHCBP1-205ENST00000566016 OR10P1Q8NGE3 313 aa15.86■□□□□ 0.13
SHCBP1-205ENST00000566016 TRGV9Q99603 122 aa15.86■□□□□ 0.13
SHCBP1-205ENST00000566016 RHPN1-AS1Q9BWJ2 59 aa15.86■□□□□ 0.13
SHCBP1-205ENST00000566016 ZNF785A8K8V0 405 aa15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 CHEK1O14757 476 aa15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 RD3LP0DJH9 198 aa15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 H2BFSP57053 126 aa15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 S100A10P60903 97 aa15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 DLK1P80370 383 aa15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 OR8G2PQ6IF36 304 aa15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 GTSCR1Q86UQ5 136 aa15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 WDR89Q96FK6 387 aaPredicted RBP15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 METTL26Q96S19 204 aa15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 VSIRQ9H7M9 311 aa15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 ALG5Q9Y673 324 aa15.85■□□□□ 0.13
SHCBP1-205ENST00000566016 IGKV1OR2-108A0A075B7D4 117 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 TSPAN4O14817 238 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 SIX6O95475 246 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 CD5P06127 495 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 PSG1P11464 419 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 NPPCP23582 126 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 CRYBB3P26998 211 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 RBPMS2Q6ZRY4 209 aaKnown RBP15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 SPAG8Q99932 426 aaPredicted RBP15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 GGACTQ9BVM4 153 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 LYRM2Q9NU23 88 aaPredicted RBP15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 SMAD5-AS1Q9Y6J3 95 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 DEDDO75618 318 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 IL4P05112 153 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 LAMTOR1Q6IAA8 161 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 TMEM144Q7Z5S9 345 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 Q8N1Y9 231 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 OR51G1Q8NGK1 321 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 TMEM231Q9H6L2 316 aa15.84■□□□□ 0.13
SHCBP1-205ENST00000566016 A0A1W2PS18 150 aa15.83■□□□□ 0.12
SHCBP1-205ENST00000566016 CCNKO75909 580 aa15.83■□□□□ 0.12
SHCBP1-205ENST00000566016 CAV2P51636 162 aa15.83■□□□□ 0.12
SHCBP1-205ENST00000566016 AKR1C1Q04828 323 aa15.83■□□□□ 0.12
SHCBP1-205ENST00000566016 OXA1LQ15070 435 aa15.83■□□□□ 0.12
SHCBP1-205ENST00000566016 DEFB121Q5J5C9 76 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms