RNA–Protein interactions for RNA: ENST00000564606.5

ATXN3-249, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 645 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-249ENST00000564606 OOSP1A8MZH6 123 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 M0R2Z0 102 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 TFF1P04155 84 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 LIPFP07098 398 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 CRYGCP07315 174 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 CT45A10P0DMU9 189 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 REG1BP48304 166 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 RAB9AP51151 201 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 RPS20P60866 119 aaKnown RBP6.17□□□□□ -1.42
ATXN3-249ENST00000564606 FAM27E3Q08E93 113 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 OR5I1Q13606 314 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 PDE6HQ13956 83 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 MMDQ15546 238 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 PRSS8Q16651 343 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 SPATA45Q537H7 98 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 FAM53AQ6NSI3 398 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-249ENST00000564606 CCDC144NLQ6NUI1 221 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 TCF23Q7RTU1 214 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 NHLRC2Q8NBF2 726 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 ST6GALNAC3Q8NDV1 305 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 OR1B1Q8NGR6 318 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 CCL17Q92583 94 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 RNASE6Q93091 150 aaKnown RBP6.17□□□□□ -1.42
ATXN3-249ENST00000564606 LEAP2Q969E1 77 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 RPEQ96AT9 228 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 C1orf159Q96HA4 380 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 FAM167A-AS1Q96KT0 104 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 RNASE7Q9H1E1 156 aaKnown RBP6.17□□□□□ -1.42
ATXN3-249ENST00000564606 JKAMPQ9P055 326 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 MRPS16Q9Y3D3 137 aaKnown RBP6.17□□□□□ -1.42
ATXN3-249ENST00000564606 F11RQ9Y624 299 aaKnown RBP6.17□□□□□ -1.42
ATXN3-249ENST00000564606 TECTAO75443 2155 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 KNTC1P50748 2209 aa6.17□□□□□ -1.42
ATXN3-249ENST00000564606 TRIOBPQ9H2D6 2365 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 DOCK7Q96N67 2140 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 USF3Q68DE3 2245 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 A0A1W2PS18 150 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 PSMB11A5LHX3 300 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 SRRM4A7MD48 611 aaKnown RBP6.16□□□□□ -1.42
ATXN3-249ENST00000564606 HIGD1CA8MV81 97 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 BMPR1BO00238 502 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 KLK10O43240 276 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 SLC25A17O43808 307 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 DEFA4P12838 97 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 ORM2P19652 201 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 PSG9Q00887 426 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 BSPH1Q075Z2 132 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 TNXAQ16473 311 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 CDPF1Q6NVV7 123 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 MRPL54Q6P161 138 aaKnown RBP6.16□□□□□ -1.42
ATXN3-249ENST00000564606 SHISA2Q6UWI4 295 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 Q6ZWC4 215 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 PPP1R27Q86WC6 154 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 OR8B3Q8NGG8 313 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 OR2T6Q8NHC8 308 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 ST6GALNAC6Q969X2 333 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 FXYD5Q96DB9 178 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 SNRNP40Q96DI7 357 aaKnown RBP6.16□□□□□ -1.42
ATXN3-249ENST00000564606 MBD6Q96DN6 1003 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 NUDT11Q96G61 164 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 WFIKKN1Q96NZ8 548 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 OR8B2Q96RD0 313 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 NEU1Q99519 415 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 NDFIP1Q9BT67 221 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 FAM103A1Q9BTL3 118 aaKnown RBP6.16□□□□□ -1.42
ATXN3-249ENST00000564606 TMEM70Q9BUB7 260 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 AAMDCQ9H7C9 122 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 ST20Q9HBF5 79 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 PAM16Q9Y3D7 125 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 CBY1Q9Y3M2 126 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 WDR87Q6ZQQ6 2873 aa6.16□□□□□ -1.42
ATXN3-249ENST00000564606 RANBP2P49792 3224 aaKnown RBP6.16□□□□□ -1.42
ATXN3-249ENST00000564606 CHD3Q12873 2000 aaKnown RBP6.15□□□□□ -1.42
ATXN3-249ENST00000564606 IGKV1OR2-108A0A075B7D4 117 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 TRAV9-2A0A087WT02 112 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.15□□□□□ -1.42
ATXN3-249ENST00000564606 TNFRSF13BO14836 293 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-249ENST00000564606 WIPF1O43516 503 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 CNIH1O95406 144 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 LTAP01374 205 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 IGLV2-8P01709 118 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 COL8A1P27658 744 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 MYCNOSP40205 109 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 UCNP55089 124 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 WT1-ASQ06250 92 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 FXYD3Q14802 87 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 ZNF124Q15973 351 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 MSMPQ1L6U9 139 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 SAPCD1Q5SSQ6 148 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 Q6ZN92 141 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 MOB3BQ86TA1 216 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 CIARTQ8N365 385 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-249ENST00000564606 TMEM75Q8N9X5 138 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 NUP35Q8NFH5 326 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 C18orf32Q8TCD1 76 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 ZNF503Q96F45 646 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 VKORC1Q9BQB6 163 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 SNHG12Q9BXW3 62 aa6.15□□□□□ -1.42
ATXN3-249ENST00000564606 MAP1LC3CQ9BXW4 147 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms