RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 PHF13Q86YI8 300 aaPredicted RBP0.67□□□□□ -2.3
CHD9-211ENST00000564600 HIST3H2BBQ8N257 126 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 OR10J5Q8NHC4 309 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 ADAT3Q96EY9 351 aaPredicted RBP0.67□□□□□ -2.3
CHD9-211ENST00000564600 BTF3L4Q96K17 158 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 PAIP2Q9BPZ3 127 aaKnown RBP0.67□□□□□ -2.3
CHD9-211ENST00000564600 SLC39A9Q9NUM3 307 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 C14orf105Q9NVL8 296 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 HEATR5BQ9P2D3 2071 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 INTS1Q8N201 2190 aaKnown RBP0.67□□□□□ -2.3
CHD9-211ENST00000564600 ZCCHC11Q5TAX3 1644 aaKnown RBP0.67□□□□□ -2.3
CHD9-211ENST00000564600 TRPM1Q7Z4N2 1603 aa0.67□□□□□ -2.3
CHD9-211ENST00000564600 TTC28Q96AY4 2481 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 ECM29Q5VYK3 1845 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 TENM3Q9P273 2699 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 ANAPC1Q9H1A4 1944 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 SETD5Q9C0A6 1442 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 IGKV3D-7A0A0C4DH55 119 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 IGKV1-9A0A0C4DH69 117 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 IGKV3OR2-268A0A0C4DH90 116 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 HCRTO43612 131 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 ORC5O43913 435 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 PFDN1O60925 122 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 OR5F1O95221 314 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 RNASE4P34096 147 aaKnown RBP0.66□□□□□ -2.3
CHD9-211ENST00000564600 MAGEA12P43365 314 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 TSNQ15631 228 aaKnown RBP0.66□□□□□ -2.3
CHD9-211ENST00000564600 LIN52Q52LA3 116 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 MED12LQ86YW9 2145 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 OR10X1Q8NGY0 326 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 GNPDA2Q8TDQ7 276 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 LINC00467Q9BRT7 94 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 ADAT1Q9BUB4 502 aaKnown RBP0.66□□□□□ -2.3
CHD9-211ENST00000564600 MRPL32Q9BYC8 188 aaKnown RBP0.66□□□□□ -2.3
CHD9-211ENST00000564600 IMUPQ9GZP8 106 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 CCDC90BQ9GZT6 254 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 RNASE7Q9H1E1 156 aaKnown RBP0.66□□□□□ -2.3
CHD9-211ENST00000564600 ARMC1Q9NVT9 282 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 TAS2R4Q9NYW5 299 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 ARL2BPQ9Y2Y0 163 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 OBSL1O75147 1896 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 HECW1Q76N89 1606 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 TNRC6BQ9UPQ9 1833 aaKnown RBP0.66□□□□□ -2.3
CHD9-211ENST00000564600 RP1P56715 2156 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 MYH7BA7E2Y1 1941 aa0.66□□□□□ -2.3
CHD9-211ENST00000564600 hCG_1818297A0A087WSY0 165 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 A0A087X0T9 212 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 A8MT66 165 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 SULT1B1O43704 296 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 OR4E1P0C645 316 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 CASP1P29466 404 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 RHOGP84095 191 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 AAED1Q7RTV5 226 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 LINC00471Q8N535 108 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 PXT1Q8NFP0 134 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 OR13D1Q8NGV5 346 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 OR4C6Q8NH72 309 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 SLAMF6Q96DU3 332 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 TEX37Q96LM6 180 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 SIGMAR1Q99720 223 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 TMEM126AQ9H061 195 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 PSTPIP2Q9H939 334 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 OSTCQ9NRP0 149 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 EXPH5Q8NEV8 1989 aa0.65□□□□□ -2.31
CHD9-211ENST00000564600 NISCHQ9Y2I1 1504 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 IGKV2-40A0A087WW87 121 aaPredicted RBP0.64□□□□□ -2.31
CHD9-211ENST00000564600 TRAV12-1A0A0B4J245 112 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 IGKV2-29A2NJV5 120 aaPredicted RBP0.64□□□□□ -2.31
CHD9-211ENST00000564600 OR1I1O60431 355 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 IGKV2D-40P01614 121 aaPredicted RBP0.64□□□□□ -2.31
CHD9-211ENST00000564600 CRPP02741 224 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 IL9P15248 144 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 S100A4P26447 101 aaKnown RBP0.64□□□□□ -2.31
CHD9-211ENST00000564600 RRN3P1Q2M238 152 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 C3orf56Q8N813 242 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 CANT1Q8WVQ1 401 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 C4orf3Q8WVX3 66 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 ANP32BQ92688 251 aaKnown RBP0.64□□□□□ -2.31
CHD9-211ENST00000564600 LINC00526Q96FQ7 95 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 YPEL2Q96QA6 119 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 TMEM70Q9BUB7 260 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 KIFC1Q9BW19 673 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 SH3BGRL3Q9H299 93 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 CENPHQ9H3R5 247 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 TRABDQ9H4I3 376 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 UQCC1Q9NVA1 299 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 OR5AC2Q9NZP5 309 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 NCAPD3P42695 1498 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 SCN10AQ9Y5Y9 1956 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 ARFGEF3Q5TH69 2177 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 CACNA1BQ00975 2339 aa0.64□□□□□ -2.31
CHD9-211ENST00000564600 IGKV3-7A0A075B6H7 116 aa0.63□□□□□ -2.31
CHD9-211ENST00000564600 IGKV1D-42A0A075B6H8 117 aa0.63□□□□□ -2.31
CHD9-211ENST00000564600 C2orf70A6NJV1 201 aa0.63□□□□□ -2.31
CHD9-211ENST00000564600 INE1O15225 51 aa0.63□□□□□ -2.31
CHD9-211ENST00000564600 LYZL6O75951 148 aa0.63□□□□□ -2.31
CHD9-211ENST00000564600 SPI1P17947 270 aa0.63□□□□□ -2.31
CHD9-211ENST00000564600 C22orf39Q6P5X5 142 aa0.63□□□□□ -2.31
CHD9-211ENST00000564600 KRTAP26-1Q6PEX3 210 aa0.63□□□□□ -2.31
CHD9-211ENST00000564600 DPPA3Q6W0C5 159 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms