RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 APOA2P02652 100 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 PPBPP02775 128 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 CTSGP08311 255 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 SCGB1A1P11684 91 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 RPL7P18124 248 aaKnown RBP1.49□□□□□ -2.17
UBR1-205ENST00000564540 OGNP20774 298 aaKnown RBP1.49□□□□□ -2.17
UBR1-205ENST00000564540 CSRP1P21291 193 aaKnown RBP1.49□□□□□ -2.17
UBR1-205ENST00000564540 NFYBP25208 207 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 RNASE4P34096 147 aaKnown RBP1.49□□□□□ -2.17
UBR1-205ENST00000564540 EIF2B2P49770 351 aaKnown RBP1.49□□□□□ -2.17
UBR1-205ENST00000564540 INSL3P51460 131 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 YPEL3P61236 119 aaPredicted RBP1.49□□□□□ -2.17
UBR1-205ENST00000564540 S100A12P80511 92 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 LYZL1Q6UWQ5 148 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 HIST3H2BBQ8N257 126 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 OR4C16Q8NGL9 310 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 OR5J2Q8NH18 312 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 THEM6Q8WUY1 208 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 SKA2Q8WVK7 121 aaPredicted RBP1.49□□□□□ -2.17
UBR1-205ENST00000564540 C11orf40Q8WZ69 217 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 SCGB3A1Q96QR1 104 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 CCDC32Q9BV29 185 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 OR2J1Q9GZK6 312 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 OSTCQ9NRP0 149 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 HHLA3Q9XRX5 114 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 TIMM9Q9Y5J7 89 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 UHRF1BP1Q6BDS2 1440 aa1.49□□□□□ -2.17
UBR1-205ENST00000564540 VWDEQ8N2E2 1590 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 A0A1B0GVG6 124 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 C19orf84I3L1E1 186 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 KPNA4O00629 521 aaPredicted RBP1.48□□□□□ -2.17
UBR1-205ENST00000564540 PFDN1O60925 122 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 DHFRP00374 187 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 TRGC2P03986 189 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 EMP1P54849 157 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 EIF5AP63241 154 aaKnown RBP1.48□□□□□ -2.17
UBR1-205ENST00000564540 ZNF181Q2M3W8 571 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 FAM27BQ5VT28 67 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 FKBP1CQ5VVH2 108 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 AGTRAPQ6RW13 159 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 SLC35E3Q7Z769 313 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 TRAPPC6BQ86SZ2 158 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 SIGLECL1Q8N7X8 197 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 MBD3L1Q8WWY6 194 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 MAFIPQ8WZ33 124 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 ZC2HC1AQ96GY0 325 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 TEX37Q96LM6 180 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 CCDC115Q96NT0 180 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 AIF1LQ9BQI0 150 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 CKLFQ9UBR5 152 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 PSORS1C2Q9UIG4 136 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 ASB4Q9Y574 426 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 SCN9AQ15858 1988 aa1.48□□□□□ -2.17
UBR1-205ENST00000564540 ARHGEF10O15013 1369 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 SLX4Q8IY92 1834 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 MYH11P35749 1972 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 TOPBP1Q92547 1522 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 MYO9BQ13459 2157 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 A0A087WX48 190 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 IGHV1-18A0A0C4DH31 117 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 MUC21A0A0G2JKD1 596 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 TRBV10-2A0A0K0K1G8 114 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 MUC21A0A140T8X8 626 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 TMEM212A6NML5 194 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 H7BYZ3 331 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 TMEM256-PLSCR3K7ERE1 68 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 OR2T1O43869 369 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 CLPSP04118 112 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 PRB1P04280 392 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 RPS3P23396 243 aaKnown RBP eCLIP1.47□□□□□ -2.17
UBR1-205ENST00000564540 FKBP2P26885 142 aaKnown RBP1.47□□□□□ -2.17
UBR1-205ENST00000564540 SRP14P37108 136 aaKnown RBP1.47□□□□□ -2.17
UBR1-205ENST00000564540 HRCT1Q6UXD1 115 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 C3orf56Q8N813 242 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 OR9Q1Q8NGQ5 310 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 CANT1Q8WVQ1 401 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 TMEM106AQ96A25 262 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 HSPB9Q9BQS6 159 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 GINS4Q9BRT9 223 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 DOHHQ9BU89 302 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 RTL8AQ9BWD3 113 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 MRPL32Q9BYC8 188 aaKnown RBP1.47□□□□□ -2.17
UBR1-205ENST00000564540 C6orf62Q9GZU0 229 aaPredicted RBP1.47□□□□□ -2.17
UBR1-205ENST00000564540 JPT1Q9UK76 154 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 CCL26Q9Y258 94 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 NUBP2Q9Y5Y2 271 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 CCDC88AQ3V6T2 1871 aa1.47□□□□□ -2.17
UBR1-205ENST00000564540 ECM29Q5VYK3 1845 aa1.46□□□□□ -2.18
UBR1-205ENST00000564540 IGHV3-64A0A075B6Q5 118 aa1.46□□□□□ -2.18
UBR1-205ENST00000564540 TLCD2A6NGC4 264 aa1.46□□□□□ -2.18
UBR1-205ENST00000564540 RFPL4AA6NLU0 287 aa1.46□□□□□ -2.18
UBR1-205ENST00000564540 RFPL4AL1F8VTS6 287 aa1.46□□□□□ -2.18
UBR1-205ENST00000564540 SHBGP04278 402 aa1.46□□□□□ -2.18
UBR1-205ENST00000564540 HMGN1P05114 100 aa1.46□□□□□ -2.18
UBR1-205ENST00000564540 OR10J4P0C629 311 aa1.46□□□□□ -2.18
UBR1-205ENST00000564540 CRYGAP11844 174 aa1.46□□□□□ -2.18
UBR1-205ENST00000564540 NFYAP23511 347 aaPredicted RBP1.46□□□□□ -2.18
UBR1-205ENST00000564540 POLR2HP52434 150 aaKnown RBP1.46□□□□□ -2.18
UBR1-205ENST00000564540 FXYD2P54710 66 aa1.46□□□□□ -2.18
UBR1-205ENST00000564540 SMCO1Q147U7 214 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms