RNA–Protein interactions for RNA: ENST00000564387.5

USB1-209, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-209ENST00000564387 OR1S2Q8NGQ3 325 aa13.01□□□□□ -0.33
USB1-209ENST00000564387 NPIPB3Q92617 1050 aa13.01□□□□□ -0.33
USB1-209ENST00000564387 SMIM8Q96KF7 97 aa13.01□□□□□ -0.33
USB1-209ENST00000564387 PUS1Q9Y606 427 aaKnown RBP eCLIP13.01□□□□□ -0.33
USB1-209ENST00000564387 DNAH9Q9NYC9 4486 aa13□□□□□ -0.33
USB1-209ENST00000564387 IGHV3OR16-8A0A075B7F1 116 aa13□□□□□ -0.33
USB1-209ENST00000564387 TRAV14DV4A0A0A6YYC5 116 aa13□□□□□ -0.33
USB1-209ENST00000564387 IGHV7-4-1A0A0J9YVY3 117 aa13□□□□□ -0.33
USB1-209ENST00000564387 SNRPGP15A8MWD9 76 aa13□□□□□ -0.33
USB1-209ENST00000564387 SCGB2A1O75556 95 aa13□□□□□ -0.33
USB1-209ENST00000564387 SCAF4O95104 1147 aaKnown RBP13□□□□□ -0.33
USB1-209ENST00000564387 OR10J1P30954 320 aa13□□□□□ -0.33
USB1-209ENST00000564387 RAB11AP62491 216 aa13□□□□□ -0.33
USB1-209ENST00000564387 IL15RAQ13261 267 aa13□□□□□ -0.33
USB1-209ENST00000564387 GAMTQ14353 236 aa13□□□□□ -0.33
USB1-209ENST00000564387 TIGITQ495A1 244 aa13□□□□□ -0.33
USB1-209ENST00000564387 GINS3Q9BRX5 216 aa13□□□□□ -0.33
USB1-209ENST00000564387 CHEK1O14757 476 aa12.99□□□□□ -0.33
USB1-209ENST00000564387 TSPAN4O14817 238 aa12.99□□□□□ -0.33
USB1-209ENST00000564387 PRAF2O60831 178 aa12.99□□□□□ -0.33
USB1-209ENST00000564387 YIF1AO95070 293 aa12.99□□□□□ -0.33
USB1-209ENST00000564387 TAS2R30P59541 319 aa12.99□□□□□ -0.33
USB1-209ENST00000564387 WDR89Q96FK6 387 aaPredicted RBP12.99□□□□□ -0.33
USB1-209ENST00000564387 RAB40CQ96S21 281 aa12.99□□□□□ -0.33
USB1-209ENST00000564387 VSIRQ9H7M9 311 aa12.99□□□□□ -0.33
USB1-209ENST00000564387 C19orf73Q9NVV2 129 aa12.99□□□□□ -0.33
USB1-209ENST00000564387 RCL1Q9Y2P8 373 aaKnown RBP12.99□□□□□ -0.33
USB1-209ENST00000564387 PMS2P5A8MQ11 134 aa12.98□□□□□ -0.33
USB1-209ENST00000564387 INMT-MINDY4F8WBC2 141 aa12.98□□□□□ -0.33
USB1-209ENST00000564387 CCSO14618 274 aa12.98□□□□□ -0.33
USB1-209ENST00000564387 ZNF207O43670 478 aaKnown RBP12.98□□□□□ -0.33
USB1-209ENST00000564387 MBPP02686 304 aaPredicted RBP12.98□□□□□ -0.33
USB1-209ENST00000564387 SPANXN5Q5MJ07 72 aa12.98□□□□□ -0.33
USB1-209ENST00000564387 FAM90A2PQ658T7 463 aa12.98□□□□□ -0.33
USB1-209ENST00000564387 C2orf50Q96LR7 162 aa12.98□□□□□ -0.33
USB1-209ENST00000564387 RHPN1-AS1Q9BWJ2 59 aa12.98□□□□□ -0.33
USB1-209ENST00000564387 GPN1Q9HCN4 374 aaPredicted RBP12.98□□□□□ -0.33
USB1-209ENST00000564387 STRAPQ9Y3F4 350 aaKnown RBP12.98□□□□□ -0.33
USB1-209ENST00000564387 IGKV1D-37A0A075B6S9 117 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 TSC22D2O75157 780 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 TOMM40O96008 361 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 IGHV4-30-4P0DP06 118 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 CRYBB3P26998 211 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 TMEM14EPQ6UXP3 125 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 GTSCR1Q86UQ5 136 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 ACY3Q96HD9 319 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 SPAG8Q99932 426 aaPredicted RBP12.97□□□□□ -0.33
USB1-209ENST00000564387 C11orf1Q9H5F2 150 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 PSENENQ9NZ42 101 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 GSKIPQ9P0R6 139 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 U3KQE9 123 aa12.97□□□□□ -0.33
USB1-209ENST00000564387 IGKV1OR2-108A0A075B7D4 117 aa12.96□□□□□ -0.33
USB1-209ENST00000564387 SSSCA1O60232 199 aa12.96□□□□□ -0.33
USB1-209ENST00000564387 CD7P09564 240 aa12.96□□□□□ -0.33
USB1-209ENST00000564387 GUCA2BQ16661 112 aa12.96□□□□□ -0.33
USB1-209ENST00000564387 LAMTOR1Q6IAA8 161 aa12.96□□□□□ -0.33
USB1-209ENST00000564387 RBPMS2Q6ZRY4 209 aaKnown RBP12.96□□□□□ -0.33
USB1-209ENST00000564387 THAP8Q8NA92 274 aa12.96□□□□□ -0.33
USB1-209ENST00000564387 Q8WTZ3 238 aa12.96□□□□□ -0.33
USB1-209ENST00000564387 SLC35E1Q96K37 410 aa12.96□□□□□ -0.33
USB1-209ENST00000564387 RNF2Q99496 336 aa12.96□□□□□ -0.33
USB1-209ENST00000564387 NEURL2Q9BR09 285 aa12.96□□□□□ -0.33
USB1-209ENST00000564387 SELENOKQ9Y6D0 94 aa12.96□□□□□ -0.33
USB1-209ENST00000564387 C7orf66A4D0T2 115 aa12.95□□□□□ -0.34
USB1-209ENST00000564387 H3BP45 60 aa12.95□□□□□ -0.34
USB1-209ENST00000564387 APOHP02749 345 aaPredicted RBP12.95□□□□□ -0.34
USB1-209ENST00000564387 CD5P06127 495 aa12.95□□□□□ -0.34
USB1-209ENST00000564387 FRMD6-AS1P0C7T7 363 aa12.95□□□□□ -0.34
USB1-209ENST00000564387 NPPCP23582 126 aa12.95□□□□□ -0.34
USB1-209ENST00000564387 LILRB2Q8N423 598 aa12.95□□□□□ -0.34
USB1-209ENST00000564387 C5orf51A6NDU8 294 aa12.94□□□□□ -0.34
USB1-209ENST00000564387 K7EPK0 472 aa12.94□□□□□ -0.34
USB1-209ENST00000564387 NHLRC4P0CG21 123 aaPredicted RBP12.94□□□□□ -0.34
USB1-209ENST00000564387 RD3LP0DJH9 198 aa12.94□□□□□ -0.34
USB1-209ENST00000564387 PSG1P11464 419 aa12.94□□□□□ -0.34
USB1-209ENST00000564387 CD81P60033 236 aa12.94□□□□□ -0.34
USB1-209ENST00000564387 GSG1LQ6UXU4 331 aa12.94□□□□□ -0.34
USB1-209ENST00000564387 LINC00322Q6ZN03 302 aaPredicted RBP12.94□□□□□ -0.34
USB1-209ENST00000564387 ST8SIA2Q92186 375 aa12.94□□□□□ -0.34
USB1-209ENST00000564387 TRGV9Q99603 122 aa12.94□□□□□ -0.34
USB1-209ENST00000564387 FAM110AQ9BQ89 295 aa12.94□□□□□ -0.34
USB1-209ENST00000564387 FAM25EA8MYX2 175 aa12.93□□□□□ -0.34
USB1-209ENST00000564387 FNDC10F2Z333 226 aa12.93□□□□□ -0.34
USB1-209ENST00000564387 SCGB1D2O95969 90 aa12.93□□□□□ -0.34
USB1-209ENST00000564387 PTTG1O95997 202 aa12.93□□□□□ -0.34
USB1-209ENST00000564387 BMI1P35226 326 aa12.93□□□□□ -0.34
USB1-209ENST00000564387 METTL26Q96S19 204 aa12.93□□□□□ -0.34
USB1-209ENST00000564387 IGHV3-49A0A0A0MS15 119 aa12.92□□□□□ -0.34
USB1-209ENST00000564387 A0A1W2PS18 150 aa12.92□□□□□ -0.34
USB1-209ENST00000564387 ZFP92A6NM28 416 aa12.92□□□□□ -0.34
USB1-209ENST00000564387 ZNF90Q03938 601 aa12.92□□□□□ -0.34
USB1-209ENST00000564387 USF2Q15853 346 aaPredicted RBP12.92□□□□□ -0.34
USB1-209ENST00000564387 ACOT7LQ6ZUV0 252 aa12.92□□□□□ -0.34
USB1-209ENST00000564387 TMEM144Q7Z5S9 345 aa12.92□□□□□ -0.34
USB1-209ENST00000564387 SBSPONQ8IVN8 264 aa12.92□□□□□ -0.34
USB1-209ENST00000564387 OR51G1Q8NGK1 321 aa12.92□□□□□ -0.34
USB1-209ENST00000564387 PAIP2BQ9ULR5 123 aaKnown RBP12.92□□□□□ -0.34
USB1-209ENST00000564387 IGHV3OR16-13A0A075B7E8 117 aa12.91□□□□□ -0.34
USB1-209ENST00000564387 IGHV3-74A0A0B4J1X5 117 aa12.91□□□□□ -0.34
USB1-209ENST00000564387 OR11H12B2RN74 326 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms