RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 OR4E1P0C645 316 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 ZNF25P17030 456 aaPredicted RBP0.27□□□□□ -2.37
CHD9-207ENST00000562806 CASP1P29466 404 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 IMPG1Q17R60 797 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 LINC01554Q52M75 96 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 TEX261Q6UWH6 196 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 KRT222Q8N1A0 295 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 BORCS7Q96B45 105 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 CMSS1Q9BQ75 279 aaKnown RBP0.27□□□□□ -2.37
CHD9-207ENST00000562806 CCDC90BQ9GZT6 254 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 C10orf95Q9H7T3 257 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 CDC42SE1Q9NRR8 79 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 CYSLTR1Q9Y271 337 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 U3KQ87 197 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 NEO1Q92859 1461 aa0.27□□□□□ -2.37
CHD9-207ENST00000562806 MDN1Q9NU22 5596 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 A0A087X0T9 212 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 CLDN24A6NM45 220 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 J3QRK9 145 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 OMPP47874 163 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 AP3S2P59780 193 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 TSNQ15631 228 aaKnown RBP0.26□□□□□ -2.37
CHD9-207ENST00000562806 ESRGQ1W209 222 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 BRMS1LQ5PSV4 323 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 LCA10Q71F78 164 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 GKN2Q86XP6 184 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 OR6V1Q8N148 313 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 CLDN22Q8N7P3 220 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 C8orf76Q96K31 380 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 C2orf50Q96LR7 162 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 PARD6GQ9BYG4 376 aaPredicted RBP0.26□□□□□ -2.37
CHD9-207ENST00000562806 C6orf62Q9GZU0 229 aaPredicted RBP0.26□□□□□ -2.37
CHD9-207ENST00000562806 OR51V1Q9H2C8 321 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 C14orf132Q9NPU4 83 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 V9GYY5 206 aaPredicted RBP0.26□□□□□ -2.37
CHD9-207ENST00000562806 MYO3BQ8WXR4 1341 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 KIF13BQ9NQT8 1826 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 CNTRLQ7Z7A1 2325 aa0.26□□□□□ -2.37
CHD9-207ENST00000562806 ROBO3Q96MS0 1386 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 TRAV3A0A0B4J244 114 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 FAM236DA0A1B0GTK5 79 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 FAM236CP0DP71 79 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 ANP32AP39687 249 aaKnown RBP0.25□□□□□ -2.37
CHD9-207ENST00000562806 DEFA1P59665 94 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 IAH1Q2TAA2 248 aaPredicted RBP0.25□□□□□ -2.37
CHD9-207ENST00000562806 DEFB113Q30KQ7 82 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 FAM74A1Q5RGS3 127 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 PTRHD1Q6GMV3 140 aaKnown RBP0.25□□□□□ -2.37
CHD9-207ENST00000562806 CLECL1Q8IZS7 167 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 C12orf45Q8N5I9 185 aaPredicted RBP0.25□□□□□ -2.37
CHD9-207ENST00000562806 LINC00301Q8NCQ3 95 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 OR52R1Q8NGF1 315 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 OR8D4Q8NGM9 314 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 OR2T10Q8NGZ9 312 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 CT55Q8WUE5 264 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 HIST1H2BLQ99880 126 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 RNF122Q9H9V4 155 aa0.25□□□□□ -2.37
CHD9-207ENST00000562806 NOSIPQ9Y314 301 aaKnown RBP0.25□□□□□ -2.37
CHD9-207ENST00000562806 KCPQ6ZWJ8 1503 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 hADV38S2A0JD32 116 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 KPNA3O00505 521 aaPredicted RBP0.24□□□□□ -2.37
CHD9-207ENST00000562806 CCL25O15444 150 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 CNIH1O95406 144 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 ZNF682O95780 498 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 DNAL4O96015 105 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 SERPINE1P05121 402 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 PPIBP23284 216 aaKnown RBP0.24□□□□□ -2.37
CHD9-207ENST00000562806 CEBPGP53567 150 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 PSG9Q00887 426 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 EDDM3AQ14507 147 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 C12orf74Q32Q52 190 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 TRAPPC5Q8IUR0 188 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 GDPD1Q8N9F7 314 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 PLPP5Q8NEB5 264 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 FAM172AQ8WUF8 416 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 BCL2L10Q9HD36 194 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 NIT2Q9NQR4 276 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 TVP23BQ9NYZ1 205 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 TMEM14CQ9P0S9 112 aa0.24□□□□□ -2.37
CHD9-207ENST00000562806 UTP11Q9Y3A2 253 aaKnown RBP0.24□□□□□ -2.37
CHD9-207ENST00000562806 MACF1Q9UPN3 7388 aaKnown RBP0.24□□□□□ -2.37
CHD9-207ENST00000562806 MED1Q15648 1581 aaPredicted RBP0.23□□□□□ -2.37
CHD9-207ENST00000562806 KDM6AO15550 1401 aaPredicted RBP0.23□□□□□ -2.37
CHD9-207ENST00000562806 EML6Q6ZMW3 1958 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 FSIP2Q5CZC0 6907 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 ECM29Q5VYK3 1845 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 hCG_1818297A0A087WSY0 165 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 A0A087WUJ7 227 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 TRBV6-4A0A1B0GX49 114 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 A8MT66 165 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 C1orf196B1AJZ1 125 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 CCL16O15467 120 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 CYB5BO43169 146 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 RPP14O95059 124 aaKnown RBP0.23□□□□□ -2.37
CHD9-207ENST00000562806 DHFRP00374 187 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 C8GP07360 202 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 EFNA4P52798 201 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 RHOBP62745 196 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 HIST1H3AP68431 136 aa0.23□□□□□ -2.37
CHD9-207ENST00000562806 H3F3AP84243 136 aa0.23□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms