RNA–Protein interactions for RNA: ENST00000562540.1

DENND4A-205, Transcript of DENN domain containing 4A, humanhuman

TSL 2

Gene DENND4A, Length 629 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-205ENST00000562540 CASP1P29466 404 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 YPEL3P61236 119 aaPredicted RBP0.46□□□□□ -2.34
DENND4A-205ENST00000562540 C1orf137Q5JT78 98 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 SBSPONQ8IVN8 264 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 KRT222Q8N1A0 295 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 C3orf56Q8N813 242 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 OR10J5Q8NHC4 309 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 BORCS5Q969J3 196 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 TSPAN32Q96QS1 320 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 AMELYQ99218 206 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 CDC42SE1Q9NRR8 79 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 HS3ST2Q9Y278 367 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 MCM3APO60318 1980 aa0.46□□□□□ -2.34
DENND4A-205ENST00000562540 WRNQ14191 1432 aaPredicted RBP eCLIP0.46□□□□□ -2.34
DENND4A-205ENST00000562540 MTUS2Q5JR59 1369 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 TRAV26-2A0A0B4J265 109 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 CCDC160A6NGH7 325 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 CHP2O43745 196 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 SERPINA6P08185 405 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 OR4E1P0C645 316 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 MPV17LQ2QL34 196 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 SOSTDC1Q6X4U4 206 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 CLECL1Q8IZS7 167 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 Q8N6K4 173 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 C8orf76Q96K31 380 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 C6orf62Q9GZU0 229 aaPredicted RBP0.45□□□□□ -2.34
DENND4A-205ENST00000562540 EPDR1Q9UM22 224 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 CYSLTR1Q9Y271 337 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 TAF1LQ8IZX4 1826 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 ZDBF2Q9HCK1 2354 aa0.45□□□□□ -2.34
DENND4A-205ENST00000562540 C7orf71A4D174 169 aa0.44□□□□□ -2.34
DENND4A-205ENST00000562540 CLDN24A6NM45 220 aa0.44□□□□□ -2.34
DENND4A-205ENST00000562540 ZNF736B4DX44 427 aaPredicted RBP0.44□□□□□ -2.34
DENND4A-205ENST00000562540 OR2J2O76002 312 aa0.44□□□□□ -2.34
DENND4A-205ENST00000562540 OMPP47874 163 aa0.44□□□□□ -2.34
DENND4A-205ENST00000562540 DEFB113Q30KQ7 82 aa0.44□□□□□ -2.34
DENND4A-205ENST00000562540 LINC01554Q52M75 96 aa0.44□□□□□ -2.34
DENND4A-205ENST00000562540 BRMS1LQ5PSV4 323 aa0.44□□□□□ -2.34
DENND4A-205ENST00000562540 CLDN22Q8N7P3 220 aa0.44□□□□□ -2.34
DENND4A-205ENST00000562540 OR8D4Q8NGM9 314 aa0.44□□□□□ -2.34
DENND4A-205ENST00000562540 TEX47Q8TBZ9 253 aa0.44□□□□□ -2.34
DENND4A-205ENST00000562540 OR51V1Q9H2C8 321 aa0.44□□□□□ -2.34
DENND4A-205ENST00000562540 UTP11Q9Y3A2 253 aaKnown RBP0.44□□□□□ -2.34
DENND4A-205ENST00000562540 A0A087X0T9 212 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 FAM236DA0A1B0GTK5 79 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 NCR3O14931 201 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 CNIH1O95406 144 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 FAM236CP0DP71 79 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 ANP32AP39687 249 aaKnown RBP0.43□□□□□ -2.34
DENND4A-205ENST00000562540 IMPG1Q17R60 797 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 KRTAP19-3Q7Z4W3 81 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 OR6V1Q8N148 313 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 CT55Q8WUE5 264 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 BORCS7Q96B45 105 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 C2orf50Q96LR7 162 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 CCDC42Q96M95 316 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 CMSS1Q9BQ75 279 aaKnown RBP0.43□□□□□ -2.34
DENND4A-205ENST00000562540 V9GYY5 206 aaPredicted RBP0.43□□□□□ -2.34
DENND4A-205ENST00000562540 APCP25054 2843 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 SBF1O95248 1867 aa0.43□□□□□ -2.34
DENND4A-205ENST00000562540 MYH7BA7E2Y1 1941 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 SYNE2Q8WXH0 6885 aaKnown RBP0.42□□□□□ -2.34
DENND4A-205ENST00000562540 ADGRB2O60241 1585 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 hCG_1818297A0A087WSY0 165 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 A8MT66 165 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 RHOBP62745 196 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 ESRGQ1W209 222 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 IAH1Q2TAA2 248 aaPredicted RBP0.42□□□□□ -2.34
DENND4A-205ENST00000562540 FAM74A1Q5RGS3 127 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 PTRHD1Q6GMV3 140 aaKnown RBP0.42□□□□□ -2.34
DENND4A-205ENST00000562540 TRAPPC5Q8IUR0 188 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 PATE1Q8WXA2 126 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 HIST1H2BLQ99880 126 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 TMEM70Q9BUB7 260 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 FSIP2Q5CZC0 6907 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 NAV2Q8IVL1 2488 aa0.42□□□□□ -2.34
DENND4A-205ENST00000562540 SNAPC4Q5SXM2 1469 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 MYO3BQ8WXR4 1341 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 A0A087WUJ7 227 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 A0A1W2PPM0 123 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 hADV38S2A0JD32 116 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 C1orf196B1AJZ1 125 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 CCL25O15444 150 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 DNAL4O96015 105 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 SMIM17P0DL12 118 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 PPIBP23284 216 aaKnown RBP0.41□□□□□ -2.34
DENND4A-205ENST00000562540 AP3S2P59780 193 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 TSNQ15631 228 aaKnown RBP0.41□□□□□ -2.34
DENND4A-205ENST00000562540 GKN2Q86XP6 184 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 GDPD1Q8N9F7 314 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 LINC00301Q8NCQ3 95 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 WFDC5Q8TCV5 224 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 ITFG2Q969R8 447 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 BCL2L10Q9HD36 194 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 UQCC1Q9NVA1 299 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 TMEM14CQ9P0S9 112 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 FBXO5Q9UKT4 447 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 CITO14578 2027 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 ADCY9O60503 1353 aa0.41□□□□□ -2.34
DENND4A-205ENST00000562540 OBSL1O75147 1896 aa0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms