RNA–Protein interactions for RNA: ENST00000562363.5

SCAMP2-202, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 5

Gene SCAMP2, Length 638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-202ENST00000562363 NEDD8Q15843 81 aa8.22□□□□□ -1.09
SCAMP2-202ENST00000562363 USF2Q15853 346 aaPredicted RBP8.22□□□□□ -1.09
SCAMP2-202ENST00000562363 BSXQ3C1V8 233 aa8.22□□□□□ -1.09
SCAMP2-202ENST00000562363 RNF212Q495C1 297 aa8.22□□□□□ -1.09
SCAMP2-202ENST00000562363 CROCCP3Q8IVE0 287 aa8.22□□□□□ -1.09
SCAMP2-202ENST00000562363 OR1S2Q8NGQ3 325 aa8.22□□□□□ -1.09
SCAMP2-202ENST00000562363 GPX8Q8TED1 209 aa8.22□□□□□ -1.09
SCAMP2-202ENST00000562363 Q8WTZ3 238 aa8.22□□□□□ -1.09
SCAMP2-202ENST00000562363 TP53RKQ96S44 253 aa8.22□□□□□ -1.09
SCAMP2-202ENST00000562363 HLA-DRB4X5D2U9 266 aa8.22□□□□□ -1.09
SCAMP2-202ENST00000562363 LRP1BQ9NZR2 4599 aa8.22□□□□□ -1.09
SCAMP2-202ENST00000562363 TEX48A0A1B0GUV7 120 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 RPS10-NUDT3A0A1W2PQS6 291 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 ATG12O94817 140 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 IGKV3-20P01619 116 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 IL4P05112 153 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 PGAM2P15259 253 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 PI3P19957 117 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 RCVRNP35243 200 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 RND2P52198 227 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 FXYD7P58549 80 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 RND3P61587 244 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 DHODHQ02127 395 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 GDF5OSQ5U4N7 250 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 FAM222AQ5U5X8 452 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 SIGLEC15Q6ZMC9 328 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 MAPKAPK5-AS1Q8N8E1 139 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 NIPSNAP3BQ9BS92 247 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 SEPSECSQ9HD40 501 aaKnown RBP8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 DKK2Q9UBU2 259 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 RFNGQ9Y644 331 aa8.21□□□□□ -1.1
SCAMP2-202ENST00000562363 NACAE9PAV3 2078 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 A0A0G2JRQ6 117 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 C3orf85A0A1B0GTC6 90 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 SMIM9A6NGZ8 99 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 C16orf90A8MZG2 172 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 M0QYG6 137 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 CDK2AP2O75956 126 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 OR10J1P30954 320 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 PIGPP57054 158 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 DEFB1P60022 68 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 YPEL3P61236 119 aaPredicted RBP8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 TRIM16LQ309B1 348 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 PRSS54Q6PEW0 395 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 TMEM88Q6PEY1 159 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 SNX29P2Q8IUI4 249 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 RNASE11Q8TAA1 199 aaKnown RBP8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 ZNF486Q96H40 463 aaPredicted RBP8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 SCPEP1Q9HB40 452 aa8.2□□□□□ -1.1
SCAMP2-202ENST00000562363 BUB3O43684 328 aa8.19□□□□□ -1.1
SCAMP2-202ENST00000562363 GSTZ1O43708 216 aaPredicted RBP8.19□□□□□ -1.1
SCAMP2-202ENST00000562363 SLC25A4P12235 298 aa8.19□□□□□ -1.1
SCAMP2-202ENST00000562363 RPS19P39019 145 aaKnown RBP8.19□□□□□ -1.1
SCAMP2-202ENST00000562363 HTR2BP41595 481 aa8.19□□□□□ -1.1
SCAMP2-202ENST00000562363 NKX2-1P43699 371 aaPredicted RBP8.19□□□□□ -1.1
SCAMP2-202ENST00000562363 TNP2Q05952 138 aa8.19□□□□□ -1.1
SCAMP2-202ENST00000562363 RRNAD1Q96FB5 475 aaKnown RBP8.19□□□□□ -1.1
SCAMP2-202ENST00000562363 YTHDF1Q9BYJ9 559 aaKnown RBP8.19□□□□□ -1.1
SCAMP2-202ENST00000562363 LOC102723971A0A1B0GUV8 181 aa8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 LSM3P62310 102 aaKnown RBP8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 OXA1LQ15070 435 aa8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 SP6Q3SY56 376 aa8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 FOXI2Q6ZQN5 318 aa8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 LHFPL1Q86WI0 220 aa8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 ZNF709Q8N972 641 aa8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 SLC24A4Q8NFF2 622 aa8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 RNASEH2CQ8TDP1 164 aaKnown RBP8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 ACY3Q96HD9 319 aa8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 SAV1Q9H4B6 383 aaPredicted RBP8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 Q9H521 79 aa8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 HEYLQ9NQ87 328 aaPredicted RBP8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 TMED3Q9Y3Q3 217 aa8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 YTHDF2Q9Y5A9 579 aaKnown RBP8.18□□□□□ -1.1
SCAMP2-202ENST00000562363 SMIM31A0A1B0GVY4 71 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 TOMM40O96008 361 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 HBE1P02100 147 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 UCP1P25874 307 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 SPCS3P61009 180 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 C2orf83Q53S99 150 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 RNASE12Q5GAN4 147 aaKnown RBP8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 CCDC71LQ8N9Z2 235 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 OR4B1Q8NGF8 309 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 LINC00052Q96N35 136 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 SLC35B3Q9H1N7 401 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 COPZ2Q9P299 210 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 COMMD3Q9UBI1 195 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 GOLT1BQ9Y3E0 138 aa8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 APOBP04114 4563 aaKnown RBP8.17□□□□□ -1.1
SCAMP2-202ENST00000562363 NXPH3O95157 252 aa8.16□□□□□ -1.1
SCAMP2-202ENST00000562363 APOA1P02647 267 aa8.16□□□□□ -1.1
SCAMP2-202ENST00000562363 RD3LP0DJH9 198 aa8.16□□□□□ -1.1
SCAMP2-202ENST00000562363 PSG1P11464 419 aa8.16□□□□□ -1.1
SCAMP2-202ENST00000562363 RORCP51449 518 aa8.16□□□□□ -1.1
SCAMP2-202ENST00000562363 FAM3BP58499 235 aaPredicted RBP8.16□□□□□ -1.1
SCAMP2-202ENST00000562363 DAD1P61803 113 aa8.16□□□□□ -1.1
SCAMP2-202ENST00000562363 AARDQ4LEZ3 155 aa8.16□□□□□ -1.1
SCAMP2-202ENST00000562363 RNASE10Q5GAN6 216 aaKnown RBP8.16□□□□□ -1.1
SCAMP2-202ENST00000562363 ETFRF1Q6IPR1 90 aa8.16□□□□□ -1.1
SCAMP2-202ENST00000562363 FAM219AQ8IW50 185 aa8.16□□□□□ -1.1
SCAMP2-202ENST00000562363 C1orf158Q8N1D5 194 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms