RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 GOSR2O14653 212 aa10.15□□□□□ -0.78
CDH1-204ENST00000562118 IFNA4P05014 189 aa10.15□□□□□ -0.78
CDH1-204ENST00000562118 FOLR2P14207 255 aa10.15□□□□□ -0.78
CDH1-204ENST00000562118 CBLN1P23435 193 aa10.15□□□□□ -0.78
CDH1-204ENST00000562118 SPANXN5Q5MJ07 72 aa10.15□□□□□ -0.78
CDH1-204ENST00000562118 HAPLN4Q86UW8 402 aa10.15□□□□□ -0.78
CDH1-204ENST00000562118 UXS1Q8NBZ7 420 aa10.15□□□□□ -0.78
CDH1-204ENST00000562118 NPIPB3Q92617 1050 aa10.15□□□□□ -0.78
CDH1-204ENST00000562118 TECRQ9NZ01 308 aaKnown RBP10.15□□□□□ -0.78
CDH1-204ENST00000562118 MRPL27Q9P0M9 148 aaKnown RBP10.15□□□□□ -0.78
CDH1-204ENST00000562118 DNAH9Q9NYC9 4486 aa10.15□□□□□ -0.79
CDH1-204ENST00000562118 FAM25EA8MYX2 175 aa10.14□□□□□ -0.79
CDH1-204ENST00000562118 DEDDO75618 318 aa10.14□□□□□ -0.79
CDH1-204ENST00000562118 OR10J1P30954 320 aa10.14□□□□□ -0.79
CDH1-204ENST00000562118 CYCSP99999 105 aaKnown RBP10.14□□□□□ -0.79
CDH1-204ENST00000562118 RAB32Q13637 225 aa10.14□□□□□ -0.79
CDH1-204ENST00000562118 DEFB114Q30KQ6 69 aa10.14□□□□□ -0.79
CDH1-204ENST00000562118 TM4SF20Q53R12 229 aa10.14□□□□□ -0.79
CDH1-204ENST00000562118 TOMM20LQ6UXN7 152 aa10.14□□□□□ -0.79
CDH1-204ENST00000562118 LYRM2Q9NU23 88 aaPredicted RBP10.14□□□□□ -0.79
CDH1-204ENST00000562118 MLXQ9UH92 298 aa10.14□□□□□ -0.79
CDH1-204ENST00000562118 IGHV3-35A0A0C4DH35 117 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 H0YIZ8 118 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 SCGB2A1O75556 95 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 SIX6O95475 246 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 SCGB1D2O95969 90 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 TOMM40O96008 361 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 DLK1P80370 383 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 DEFA6Q01524 100 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 ARL16Q0P5N6 197 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 TIGITQ495A1 244 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 TRGV9Q99603 122 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 GGACTQ9BVM4 153 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 VSIRQ9H7M9 311 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 ZNF256Q9Y2P7 627 aaPredicted RBP10.13□□□□□ -0.79
CDH1-204ENST00000562118 PUS1Q9Y606 427 aaKnown RBP eCLIP10.13□□□□□ -0.79
CDH1-204ENST00000562118 U3KQE9 123 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 COL7A1Q02388 2944 aa10.13□□□□□ -0.79
CDH1-204ENST00000562118 K7EIL1 84 aa10.12□□□□□ -0.79
CDH1-204ENST00000562118 CCNKO75909 580 aa10.12□□□□□ -0.79
CDH1-204ENST00000562118 LYL1P12980 280 aa10.12□□□□□ -0.79
CDH1-204ENST00000562118 CXCL3P19876 107 aa10.12□□□□□ -0.79
CDH1-204ENST00000562118 CRYBB3P26998 211 aa10.12□□□□□ -0.79
CDH1-204ENST00000562118 VWC2Q2TAL6 325 aa10.12□□□□□ -0.79
CDH1-204ENST00000562118 ACOT7LQ6ZUV0 252 aa10.12□□□□□ -0.79
CDH1-204ENST00000562118 TMEM144Q7Z5S9 345 aa10.12□□□□□ -0.79
CDH1-204ENST00000562118 ASB13Q8WXK3 278 aa10.12□□□□□ -0.79
CDH1-204ENST00000562118 WDR89Q96FK6 387 aaPredicted RBP10.12□□□□□ -0.79
CDH1-204ENST00000562118 SLC35E1Q96K37 410 aa10.12□□□□□ -0.79
CDH1-204ENST00000562118 SMPXQ9UHP9 88 aa10.12□□□□□ -0.79
CDH1-204ENST00000562118 LSM4Q9Y4Z0 139 aaKnown RBP10.12□□□□□ -0.79
CDH1-204ENST00000562118 TRAV25A0A0B4J276 109 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 IGHV7-4-1A0A0J9YVY3 117 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 WI2-2373I1.2A0A1W2PRP0 233 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 ZNF320A2RRD8 509 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 IZUMO1RA6ND01 250 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 ZNF785A8K8V0 405 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 SSNA1O43805 119 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 METTL15P1P0C7V9 234 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 GP9P14770 177 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 CD300EQ496F6 205 aaPredicted RBP10.11□□□□□ -0.79
CDH1-204ENST00000562118 FAM90A2PQ658T7 463 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 LCN12Q6JVE5 192 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 OR11H7Q8NGC8 314 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 PPP1R1CQ8WVI7 109 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 ACY3Q96HD9 319 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 MGAT4CQ9UBM8 478 aa10.11□□□□□ -0.79
CDH1-204ENST00000562118 LSM5Q9Y4Y9 91 aaKnown RBP10.11□□□□□ -0.79
CDH1-204ENST00000562118 CHEK1O14757 476 aa10.1□□□□□ -0.79
CDH1-204ENST00000562118 PSG1P11464 419 aa10.1□□□□□ -0.79
CDH1-204ENST00000562118 PVALBP20472 110 aaPredicted RBP10.1□□□□□ -0.79
CDH1-204ENST00000562118 Q8N1Y9 231 aa10.1□□□□□ -0.79
CDH1-204ENST00000562118 TMEM252Q8N6L7 170 aa10.1□□□□□ -0.79
CDH1-204ENST00000562118 OR10P1Q8NGE3 313 aa10.1□□□□□ -0.79
CDH1-204ENST00000562118 GINS3Q9BRX5 216 aa10.1□□□□□ -0.79
CDH1-204ENST00000562118 RNF126Q9BV68 326 aa10.1□□□□□ -0.79
CDH1-204ENST00000562118 OR5AC2Q9NZP5 309 aa10.1□□□□□ -0.79
CDH1-204ENST00000562118 TRAV14DV4A0A0A6YYC5 116 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 IGSF23A1L1A6 192 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 E5RGE8 158 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 TSPAN4O14817 238 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 MPC2O95563 127 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 P2RY1P47900 373 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 SULT1A1P50225 295 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 S100A10P60903 97 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 RRAS2P62070 204 aaPredicted RBP10.09□□□□□ -0.79
CDH1-204ENST00000562118 ZNF90Q03938 601 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 FCN2Q15485 313 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 USF2Q15853 346 aaPredicted RBP10.09□□□□□ -0.79
CDH1-204ENST00000562118 BTNL8Q6UX41 500 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 TMEM61Q8N0U2 210 aa10.09□□□□□ -0.79
CDH1-204ENST00000562118 IGHV3OR16-8A0A075B7F1 116 aa10.08□□□□□ -0.8
CDH1-204ENST00000562118 FAM24AA6NFZ4 105 aa10.08□□□□□ -0.8
CDH1-204ENST00000562118 A8MZ25 164 aa10.08□□□□□ -0.8
CDH1-204ENST00000562118 L7N2F9 121 aa10.08□□□□□ -0.8
CDH1-204ENST00000562118 APOHP02749 345 aaPredicted RBP10.08□□□□□ -0.8
CDH1-204ENST00000562118 PRB2P02812 416 aaPredicted RBP10.08□□□□□ -0.8
CDH1-204ENST00000562118 RD3LP0DJH9 198 aa10.08□□□□□ -0.8
CDH1-204ENST00000562118 PLP1P60201 277 aa10.08□□□□□ -0.8
CDH1-204ENST00000562118 VAMP2P63027 116 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms