RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 IGHV2-26A0A0B4J1V2 119 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 C5orf52A6NGY3 159 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 PPBPP02775 128 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 CD69Q07108 199 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 ADIRFQ15847 76 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 CLEC12BQ2HXU8 276 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 CST9LP1Q5W188 147 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 TEX45Q8NA69 505 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 BEND2Q8NDZ0 799 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 C8orf46Q8TAG6 207 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 RNASEH2CQ8TDP1 164 aaKnown RBP9.35□□□□□ -0.91
PCAT1-202ENST00000561978 Q8WTZ3 238 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 GATAD1Q8WUU5 269 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 NEU4Q8WWR8 484 aaPredicted RBP9.35□□□□□ -0.91
PCAT1-202ENST00000561978 ANAPC16Q96DE5 110 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 CLEC7AQ9BXN2 247 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 SLC45A2Q9UMX9 530 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 AMMECR1Q9Y4X0 333 aaPredicted RBP9.35□□□□□ -0.91
PCAT1-202ENST00000561978 SONP18583 2426 aaKnown RBP9.35□□□□□ -0.91
PCAT1-202ENST00000561978 PPIAL4CA0A0B4J2A2 164 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 A4D1N5 150 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 ARL14EPLP0DKL9 152 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 PPIAL4GP0DN37 164 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 SNRPEP62304 92 aaKnown RBP9.35□□□□□ -0.91
PCAT1-202ENST00000561978 PNKDQ8N490 385 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 OR2D3Q8NGH3 330 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 ABHD5Q8WTS1 349 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 MISP3Q96FF7 219 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 NAGKQ9UJ70 344 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 URGCP-MRPS24S4R325 110 aa9.35□□□□□ -0.91
PCAT1-202ENST00000561978 IGLV1-47P01700 117 aa9.34□□□□□ -0.91
PCAT1-202ENST00000561978 IGLV2-23P01705 113 aa9.34□□□□□ -0.91
PCAT1-202ENST00000561978 RPL23P62829 140 aaKnown RBP9.34□□□□□ -0.91
PCAT1-202ENST00000561978 DIAPH2-AS1Q14236 149 aa9.34□□□□□ -0.91
PCAT1-202ENST00000561978 GAMTQ14353 236 aa9.34□□□□□ -0.91
PCAT1-202ENST00000561978 DOK5Q9P104 306 aa9.34□□□□□ -0.91
PCAT1-202ENST00000561978 INSIG2Q9Y5U4 225 aa9.34□□□□□ -0.91
PCAT1-202ENST00000561978 ARL2-SNX15V9GYD0 113 aa9.34□□□□□ -0.91
PCAT1-202ENST00000561978 TRBV24-1A0A075B6N3 115 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 BUB1B-PAK6H3BSN5 160 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 ENSAO43768 121 aaKnown RBP9.33□□□□□ -0.92
PCAT1-202ENST00000561978 LINC00869P0C866 280 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 DEFA4P12838 97 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 GCHFRP30047 84 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 UBE2G2P60604 165 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 ZNF343Q6P1L6 599 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 MMD2Q8IY49 270 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 OR10W1Q8NGF6 305 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 OR5B12Q96R08 314 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 RNF2Q99496 336 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 ZNF430Q9H8G1 570 aaPredicted RBP9.33□□□□□ -0.92
PCAT1-202ENST00000561978 METTL1Q9UBP6 276 aaKnown RBP9.33□□□□□ -0.92
PCAT1-202ENST00000561978 IGHV4-30-2A0A087WSY4 118 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 AP4M1O00189 453 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 CXCL1P09341 107 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 TAS2R45P59539 299 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 MAPK1IP1LQ8NDC0 245 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 LY6G5BQ8NDX9 201 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 OR4P4Q8NGL7 312 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 FAM168AQ92567 244 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 NUDT11Q96G61 164 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 RNF5Q99942 180 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 TMEM167BQ9NRX6 74 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 TECRQ9NZ01 308 aaKnown RBP9.33□□□□□ -0.92
PCAT1-202ENST00000561978 FUT9Q9Y231 359 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 TNCP24821 2201 aa9.33□□□□□ -0.92
PCAT1-202ENST00000561978 WNK2Q9Y3S1 2297 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 TGIF2-C20orf24A0A0A6YYL0 155 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 H7BYZ3 331 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 ACTL6BO94805 426 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 OR10J1P30954 320 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 SCGB2A2Q13296 93 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 FAM78BQ5VT40 261 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 CIARTQ8N365 385 aaPredicted RBP9.32□□□□□ -0.92
PCAT1-202ENST00000561978 UHRF2Q96PU4 802 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 CR1P17927 2039 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 ABCA2Q9BZC7 2435 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 PPP1R2P9O14990 202 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 IGHV2-5P01817 119 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 CD99P14209 185 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 ATP5G3P48201 142 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 GNB1P62873 340 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 PQLC2Q6ZP29 291 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 C16orf82Q7Z2V1 217 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 MOB3BQ86TA1 216 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 RPEQ96AT9 228 aa9.32□□□□□ -0.92
PCAT1-202ENST00000561978 NIPBLQ6KC79 2804 aaeCLIP9.31□□□□□ -0.92
PCAT1-202ENST00000561978 IGHV1-3A0A0C4DH29 117 aa9.31□□□□□ -0.92
PCAT1-202ENST00000561978 NDUFB4O95168 129 aa9.31□□□□□ -0.92
PCAT1-202ENST00000561978 AREGP15514 252 aa9.31□□□□□ -0.92
PCAT1-202ENST00000561978 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
PCAT1-202ENST00000561978 NPPCP23582 126 aa9.31□□□□□ -0.92
PCAT1-202ENST00000561978 DDTP30046 118 aa9.31□□□□□ -0.92
PCAT1-202ENST00000561978 COMPP49747 757 aaPredicted RBP9.31□□□□□ -0.92
PCAT1-202ENST00000561978 SELENOTP62341 195 aa9.31□□□□□ -0.92
PCAT1-202ENST00000561978 WT1-ASQ06250 92 aa9.31□□□□□ -0.92
PCAT1-202ENST00000561978 KIAA0141Q14154 515 aaPredicted RBP9.31□□□□□ -0.92
PCAT1-202ENST00000561978 PRSS8Q16651 343 aa9.31□□□□□ -0.92
PCAT1-202ENST00000561978 C10orf105Q8TEF2 133 aa9.31□□□□□ -0.92
PCAT1-202ENST00000561978 BTF3L4Q96K17 158 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms