RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 ANKRD29Q8N6D5 301 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 TEX47Q8TBZ9 253 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 C2orf50Q96LR7 162 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 PPP1R2P1Q96PQ5 205 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 ACER3Q9NUN7 267 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 VPS29Q9UBQ0 182 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 APCP25054 2843 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 NCOA1Q15788 1441 aa0.29□□□□□ -2.36
HMBOX1-216ENST00000561377 MYH7BA7E2Y1 1941 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 ALPK3Q96L96 1907 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 HECW2Q9P2P5 1572 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 MYO18AQ92614 2054 aaKnown RBP0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 ARHGEF28Q8N1W1 1705 aaKnown RBP0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 ZNF736B4DX44 427 aaPredicted RBP0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 SULT1B1O43704 296 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 RBP1P09455 135 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 RPS20P60866 119 aaKnown RBP0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 IAH1Q2TAA2 248 aaPredicted RBP0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 SPOPLQ6IQ16 392 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 DNAJC9Q8WXX5 260 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 GPR146Q96CH1 333 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 C10orf95Q9H7T3 257 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 OSTCQ9NRP0 149 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 SLC35A3Q9Y2D2 325 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 ROBO3Q96MS0 1386 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 MYH10P35580 1976 aa0.28□□□□□ -2.36
HMBOX1-216ENST00000561377 HECW1Q76N89 1606 aa0.27□□□□□ -2.37
HMBOX1-216ENST00000561377 OBSL1O75147 1896 aa0.27□□□□□ -2.37
HMBOX1-216ENST00000561377 TGIF2-C20orf24A0A0A6YYL0 155 aa0.27□□□□□ -2.37
HMBOX1-216ENST00000561377 OR4C46A6NHA9 309 aa0.27□□□□□ -2.37
HMBOX1-216ENST00000561377 OR4E1P0C645 316 aa0.27□□□□□ -2.37
HMBOX1-216ENST00000561377 SPATA8Q6RVD6 105 aa0.27□□□□□ -2.37
HMBOX1-216ENST00000561377 LCA10Q71F78 164 aa0.27□□□□□ -2.37
HMBOX1-216ENST00000561377 PATE1Q8WXA2 126 aa0.27□□□□□ -2.37
HMBOX1-216ENST00000561377 DCUN1D1Q96GG9 259 aa0.27□□□□□ -2.37
HMBOX1-216ENST00000561377 CYSLTR1Q9Y271 337 aa0.27□□□□□ -2.37
HMBOX1-216ENST00000561377 NOSIPQ9Y314 301 aaKnown RBP0.27□□□□□ -2.37
HMBOX1-216ENST00000561377 CLDN24A6NM45 220 aa0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 PIRO00625 290 aa0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 MGST1P10620 155 aaKnown RBP0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 S100A4P26447 101 aaKnown RBP0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 AP3S2P59780 193 aa0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 TSNQ15631 228 aaKnown RBP0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 DEFB113Q30KQ7 82 aa0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 RNASE10Q5GAN6 216 aaKnown RBP0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 C8orf74Q6P047 294 aa0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 CLDN22Q8N7P3 220 aa0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 BORCS7Q96B45 105 aa0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 C14orf132Q9NPU4 83 aa0.26□□□□□ -2.37
HMBOX1-216ENST00000561377 ZNF462Q96JM2 2506 aa0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 MYO3BQ8WXR4 1341 aa0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 A0A087X0T9 212 aa0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 KPNA3O00505 521 aaPredicted RBP0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 TNNC2P02585 160 aa0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 ESRGQ1W209 222 aa0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 OR52R1Q8NGF1 315 aa0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 BORCS5Q969J3 196 aa0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 TMEM133Q9H2Q1 129 aa0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 CDC42SE1Q9NRR8 79 aa0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 PKIGQ9Y2B9 76 aa0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 CHCHD2Q9Y6H1 151 aaPredicted RBP0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 V9GYY5 206 aaPredicted RBP0.25□□□□□ -2.37
HMBOX1-216ENST00000561377 ASH1LQ9NR48 2969 aaKnown RBP0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 TNS3Q68CZ2 1445 aa0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 SMIM23A6NLE4 172 aa0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 J3QRK9 145 aa0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 ZNF682O95780 498 aa0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 CRYZL1O95825 349 aa0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 ZNF25P17030 456 aaPredicted RBP0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 CASP1P29466 404 aa0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 PSG9Q00887 426 aa0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 C12orf74Q32Q52 190 aa0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 CT55Q8WUE5 264 aa0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 ADAT3Q96EY9 351 aaPredicted RBP0.24□□□□□ -2.37
HMBOX1-216ENST00000561377 HEATR1Q9H583 2144 aaKnown RBP0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 CHD3Q12873 2000 aaKnown RBP0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 KDM6AO15550 1401 aaPredicted RBP0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 KIF1BO60333 1816 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 TRBV6-4A0A1B0GX49 114 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 NCR3O14931 201 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 CCL25O15444 150 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 CCL16O15467 120 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 CNIH1O95406 144 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 DHFRP00374 187 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 OMPP47874 163 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 EFNA4P52798 201 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 BRMS1LQ5PSV4 323 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 TEX261Q6UWH6 196 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 LINC00322Q6ZN03 302 aaPredicted RBP0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 GDPD1Q8N9F7 314 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 OR8D4Q8NGM9 314 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 DDI1Q8WTU0 396 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 C8orf76Q96K31 380 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 CCDC90BQ9GZT6 254 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 OR51V1Q9H2C8 321 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 U3KQ87 197 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 KCPQ6ZWJ8 1503 aa0.23□□□□□ -2.37
HMBOX1-216ENST00000561377 RTL1A6NKG5 1358 aa0.22□□□□□ -2.37
HMBOX1-216ENST00000561377 CITO14578 2027 aa0.22□□□□□ -2.37
HMBOX1-216ENST00000561377 FAM236DA0A1B0GTK5 79 aa0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms