RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 NCR3O14931 201 aa0.25□□□□□ -2.37
PSMA4-221ENST00000560842 EFNA4P52798 201 aa0.25□□□□□ -2.37
PSMA4-221ENST00000560842 C8orf74Q6P047 294 aa0.25□□□□□ -2.37
PSMA4-221ENST00000560842 TRAPPC6BQ86SZ2 158 aa0.25□□□□□ -2.37
PSMA4-221ENST00000560842 C12orf45Q8N5I9 185 aaPredicted RBP0.25□□□□□ -2.37
PSMA4-221ENST00000560842 PATE1Q8WXA2 126 aa0.25□□□□□ -2.37
PSMA4-221ENST00000560842 C7orf71A4D174 169 aa0.24□□□□□ -2.37
PSMA4-221ENST00000560842 OR4C46A6NHA9 309 aa0.24□□□□□ -2.37
PSMA4-221ENST00000560842 CCL25O15444 150 aa0.24□□□□□ -2.37
PSMA4-221ENST00000560842 TTRP02766 147 aa0.24□□□□□ -2.37
PSMA4-221ENST00000560842 OR4E1P0C645 316 aa0.24□□□□□ -2.37
PSMA4-221ENST00000560842 COTL1Q14019 142 aa0.24□□□□□ -2.37
PSMA4-221ENST00000560842 SPOPLQ6IQ16 392 aa0.24□□□□□ -2.37
PSMA4-221ENST00000560842 TEX261Q6UWH6 196 aa0.24□□□□□ -2.37
PSMA4-221ENST00000560842 SMR3AQ99954 134 aa0.24□□□□□ -2.37
PSMA4-221ENST00000560842 U3KQ87 197 aa0.24□□□□□ -2.37
PSMA4-221ENST00000560842 KIAA1549Q9HCM3 1950 aa0.23□□□□□ -2.37
PSMA4-221ENST00000560842 TRAV3A0A0B4J244 114 aa0.23□□□□□ -2.37
PSMA4-221ENST00000560842 CCDC160A6NGH7 325 aa0.23□□□□□ -2.37
PSMA4-221ENST00000560842 TNNC2P02585 160 aa0.23□□□□□ -2.37
PSMA4-221ENST00000560842 IFNA16P05015 189 aa0.23□□□□□ -2.37
PSMA4-221ENST00000560842 SERPINA6P08185 405 aa0.23□□□□□ -2.37
PSMA4-221ENST00000560842 YPEL3P61236 119 aaPredicted RBP0.23□□□□□ -2.37
PSMA4-221ENST00000560842 PSG9Q00887 426 aa0.23□□□□□ -2.37
PSMA4-221ENST00000560842 SPRNQ5BIV9 151 aa0.23□□□□□ -2.37
PSMA4-221ENST00000560842 RNF122Q9H9V4 155 aa0.23□□□□□ -2.37
PSMA4-221ENST00000560842 V9GYY5 206 aaPredicted RBP0.23□□□□□ -2.37
PSMA4-221ENST00000560842 FRAS1Q86XX4 4008 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 ARHGEF28Q8N1W1 1705 aaKnown RBP0.22□□□□□ -2.37
PSMA4-221ENST00000560842 DOCK3Q8IZD9 2030 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 CRYZL1O95825 349 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 RBP1P09455 135 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 S100A4P26447 101 aaKnown RBP0.22□□□□□ -2.37
PSMA4-221ENST00000560842 TSNQ15631 228 aaKnown RBP0.22□□□□□ -2.37
PSMA4-221ENST00000560842 ESRGQ1W209 222 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 BRMS1LQ5PSV4 323 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 CCDC122Q5T0U0 273 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 LCA10Q71F78 164 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 TEX47Q8TBZ9 253 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 ADAT3Q96EY9 351 aaPredicted RBP0.22□□□□□ -2.37
PSMA4-221ENST00000560842 OR51V1Q9H2C8 321 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 VPS29Q9UBQ0 182 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 CYSLTR1Q9Y271 337 aa0.22□□□□□ -2.37
PSMA4-221ENST00000560842 CHCHD2Q9Y6H1 151 aaPredicted RBP0.22□□□□□ -2.37
PSMA4-221ENST00000560842 SCN3AQ9NY46 2000 aa0.21□□□□□ -2.38
PSMA4-221ENST00000560842 PLXND1Q9Y4D7 1925 aa0.21□□□□□ -2.38
PSMA4-221ENST00000560842 MYO3BQ8WXR4 1341 aa0.21□□□□□ -2.38
PSMA4-221ENST00000560842 M0R036 132 aa0.21□□□□□ -2.38
PSMA4-221ENST00000560842 PIRO00625 290 aa0.21□□□□□ -2.38
PSMA4-221ENST00000560842 AHSA1O95433 338 aa0.21□□□□□ -2.38
PSMA4-221ENST00000560842 IMPG1Q17R60 797 aa0.21□□□□□ -2.38
PSMA4-221ENST00000560842 OR8D4Q8NGM9 314 aa0.21□□□□□ -2.38
PSMA4-221ENST00000560842 DCUN1D1Q96GG9 259 aa0.21□□□□□ -2.38
PSMA4-221ENST00000560842 C14orf132Q9NPU4 83 aa0.21□□□□□ -2.38
PSMA4-221ENST00000560842 KCPQ6ZWJ8 1503 aa0.21□□□□□ -2.38
PSMA4-221ENST00000560842 CASP8AP2Q9UKL3 1982 aa0.2□□□□□ -2.38
PSMA4-221ENST00000560842 A0A087X0T9 212 aa0.2□□□□□ -2.38
PSMA4-221ENST00000560842 FAM236DA0A1B0GTK5 79 aa0.2□□□□□ -2.38
PSMA4-221ENST00000560842 TRBV6-4A0A1B0GX49 114 aa0.2□□□□□ -2.38
PSMA4-221ENST00000560842 CLDN24A6NM45 220 aa0.2□□□□□ -2.38
PSMA4-221ENST00000560842 CCL16O15467 120 aa0.2□□□□□ -2.38
PSMA4-221ENST00000560842 ZNF682O95780 498 aa0.2□□□□□ -2.38
PSMA4-221ENST00000560842 FAM236CP0DP71 79 aa0.2□□□□□ -2.38
PSMA4-221ENST00000560842 IAH1Q2TAA2 248 aaPredicted RBP0.2□□□□□ -2.38
PSMA4-221ENST00000560842 LINC00322Q6ZN03 302 aaPredicted RBP0.2□□□□□ -2.38
PSMA4-221ENST00000560842 CLDN22Q8N7P3 220 aa0.2□□□□□ -2.38
PSMA4-221ENST00000560842 LINC00301Q8NCQ3 95 aa0.2□□□□□ -2.38
PSMA4-221ENST00000560842 C2orf50Q96LR7 162 aa0.2□□□□□ -2.38
PSMA4-221ENST00000560842 DEFA1P59665 94 aa0.19□□□□□ -2.38
PSMA4-221ENST00000560842 C12orf74Q32Q52 190 aa0.19□□□□□ -2.38
PSMA4-221ENST00000560842 WFDC5Q8TCV5 224 aa0.19□□□□□ -2.38
PSMA4-221ENST00000560842 C8orf76Q96K31 380 aa0.19□□□□□ -2.38
PSMA4-221ENST00000560842 UBAP1Q9NZ09 502 aa0.19□□□□□ -2.38
PSMA4-221ENST00000560842 APCP25054 2843 aa0.19□□□□□ -2.38
PSMA4-221ENST00000560842 PLXNA4Q9HCM2 1894 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 SCN10AQ9Y5Y9 1956 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 RIMBP3CA6NJZ7 1639 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 RIMBP3BA6NNM3 1639 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 PHRF1Q9P1Y6 1649 aaKnown RBP0.18□□□□□ -2.38
PSMA4-221ENST00000560842 RIMBP3Q9UFD9 1639 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 CNIH1O95406 144 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 CASP1P29466 404 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 CLECL1Q8IZS7 167 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 OR6V1Q8N148 313 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 DDI1Q8WTU0 396 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 HIST1H2BLQ99880 126 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 TMEM133Q9H2Q1 129 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 NOSIPQ9Y314 301 aaKnown RBP0.18□□□□□ -2.38
PSMA4-221ENST00000560842 TNS3Q68CZ2 1445 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 ALPK3Q96L96 1907 aa0.18□□□□□ -2.38
PSMA4-221ENST00000560842 DHFRP00374 187 aa0.17□□□□□ -2.38
PSMA4-221ENST00000560842 FAM74A1Q5RGS3 127 aa0.17□□□□□ -2.38
PSMA4-221ENST00000560842 GKN2Q86XP6 184 aa0.17□□□□□ -2.38
PSMA4-221ENST00000560842 KRT222Q8N1A0 295 aa0.17□□□□□ -2.38
PSMA4-221ENST00000560842 PLPP5Q8NEB5 264 aa0.17□□□□□ -2.38
PSMA4-221ENST00000560842 BORCS7Q96B45 105 aa0.17□□□□□ -2.38
PSMA4-221ENST00000560842 PRRT1Q99946 306 aa0.17□□□□□ -2.38
PSMA4-221ENST00000560842 CCDC90BQ9GZT6 254 aa0.17□□□□□ -2.38
PSMA4-221ENST00000560842 BCL2L10Q9HD36 194 aa0.17□□□□□ -2.38
PSMA4-221ENST00000560842 KPNA3O00505 521 aaPredicted RBP0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms