RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 MOB4Q9Y3A3 225 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 NAV3Q8IVL0 2385 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 IGHV3-21A0A0B4J1V1 117 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 COX7A2P2O60397 106 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 C8orf88P0DMB2 117 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 PATE2Q6UY27 113 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 TMEM68Q96MH6 324 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 NIPSNAP3BQ9BS92 247 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 TMEM167BQ9NRX6 74 aa10.17□□□□□ -0.78
SNX1-211ENST00000560829 PUS1Q9Y606 427 aaKnown RBP eCLIP10.17□□□□□ -0.78
SNX1-211ENST00000560829 C7orf77A4D0Y5 90 aa10.16□□□□□ -0.78
SNX1-211ENST00000560829 C11orf94C9JXX5 98 aa10.16□□□□□ -0.78
SNX1-211ENST00000560829 RNF223E7ERA6 249 aa10.16□□□□□ -0.78
SNX1-211ENST00000560829 PDE6DO43924 150 aa10.16□□□□□ -0.78
SNX1-211ENST00000560829 CEBPGP53567 150 aa10.16□□□□□ -0.78
SNX1-211ENST00000560829 KRTAP1-3Q8IUG1 177 aa10.16□□□□□ -0.78
SNX1-211ENST00000560829 OR4F5Q8NH21 305 aa10.16□□□□□ -0.78
SNX1-211ENST00000560829 FAM110DQ8TAY7 271 aaPredicted RBP10.16□□□□□ -0.78
SNX1-211ENST00000560829 ZNF503Q96F45 646 aa10.16□□□□□ -0.78
SNX1-211ENST00000560829 FAM167A-AS1Q96KT0 104 aa10.16□□□□□ -0.78
SNX1-211ENST00000560829 OR4F4Q96R69 305 aa10.16□□□□□ -0.78
SNX1-211ENST00000560829 THYN1Q9P016 225 aa10.16□□□□□ -0.78
SNX1-211ENST00000560829 M0R036 132 aa10.15□□□□□ -0.78
SNX1-211ENST00000560829 C10orf113Q5VZT2 155 aa10.15□□□□□ -0.78
SNX1-211ENST00000560829 TVP23CQ96ET8 276 aa10.15□□□□□ -0.78
SNX1-211ENST00000560829 SSX3Q99909 188 aa10.15□□□□□ -0.78
SNX1-211ENST00000560829 CELSR2Q9HCU4 2923 aa10.15□□□□□ -0.78
SNX1-211ENST00000560829 A6NDX4 124 aa10.15□□□□□ -0.79
SNX1-211ENST00000560829 ATP6V0E1O15342 81 aa10.15□□□□□ -0.79
SNX1-211ENST00000560829 TGFAP01135 160 aa10.15□□□□□ -0.79
SNX1-211ENST00000560829 IGKV1-17P01599 117 aa10.15□□□□□ -0.79
SNX1-211ENST00000560829 AMY1AP04745 511 aa10.15□□□□□ -0.79
SNX1-211ENST00000560829 IGHV4-31P0DP07 118 aa10.15□□□□□ -0.79
SNX1-211ENST00000560829 HIST1H1BP16401 226 aaKnown RBP10.15□□□□□ -0.79
SNX1-211ENST00000560829 ATP5G3P48201 142 aa10.15□□□□□ -0.79
SNX1-211ENST00000560829 CRIP2P52943 208 aaPredicted RBP10.15□□□□□ -0.79
SNX1-211ENST00000560829 PNRC1Q12796 327 aaPredicted RBP10.15□□□□□ -0.79
SNX1-211ENST00000560829 AKIRIN2Q53H80 203 aa10.15□□□□□ -0.79
SNX1-211ENST00000560829 TMEM88Q6PEY1 159 aa10.15□□□□□ -0.79
SNX1-211ENST00000560829 CBLN2Q8IUK8 224 aa10.15□□□□□ -0.79
SNX1-211ENST00000560829 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.15□□□□□ -0.79
SNX1-211ENST00000560829 SLC25A2Q9BXI2 301 aa10.15□□□□□ -0.79
SNX1-211ENST00000560829 F6UZH7 168 aa10.14□□□□□ -0.79
SNX1-211ENST00000560829 NUPL2O15504 423 aaKnown RBP10.14□□□□□ -0.79
SNX1-211ENST00000560829 PLXNB1O43157 2135 aa10.14□□□□□ -0.79
SNX1-211ENST00000560829 FABP1P07148 127 aa10.14□□□□□ -0.79
SNX1-211ENST00000560829 UBE2G2P60604 165 aa10.14□□□□□ -0.79
SNX1-211ENST00000560829 MORN5Q5VZ52 161 aa10.14□□□□□ -0.79
SNX1-211ENST00000560829 TUBA4BQ9H853 241 aa10.14□□□□□ -0.79
SNX1-211ENST00000560829 RPS10P5Q9NQ39 176 aa10.14□□□□□ -0.79
SNX1-211ENST00000560829 DOK5Q9P104 306 aa10.14□□□□□ -0.79
SNX1-211ENST00000560829 PTPN13Q12923 2485 aa10.14□□□□□ -0.79
SNX1-211ENST00000560829 WNK2Q9Y3S1 2297 aa10.14□□□□□ -0.79
SNX1-211ENST00000560829 TENM4Q6N022 2769 aa10.14□□□□□ -0.79
SNX1-211ENST00000560829 TRAV30A0A087WSZ9 112 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 ZNF727A8MUV8 499 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 HYPMO75409 117 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 FSHBP01225 129 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 PSG1P11464 419 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 NPPCP23582 126 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 FCGR2BP31994 310 aaPredicted RBP10.13□□□□□ -0.79
SNX1-211ENST00000560829 MFAP4P55083 255 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 CST9LP1Q5W188 147 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 UNQ5815/PRO19632Q6UWF5 114 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 TMEM219Q86XT9 240 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 OR5T1Q8NG75 326 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 C20orf24Q9BUV8 137 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 PARLQ9H300 379 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 GSX1Q9H4S2 264 aaPredicted RBP10.13□□□□□ -0.79
SNX1-211ENST00000560829 SDF2L1Q9HCN8 221 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 SMCO4Q9NRQ5 59 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 ZNF355PQ9NSJ1 428 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 YTHDF2Q9Y5A9 579 aaKnown RBP10.13□□□□□ -0.79
SNX1-211ENST00000560829 SOX21Q9Y651 276 aaPredicted RBP10.13□□□□□ -0.79
SNX1-211ENST00000560829 A0A087WWC5 75 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 B4DEV8 164 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 F8W735 103 aaPredicted RBP10.13□□□□□ -0.79
SNX1-211ENST00000560829 H3BUX3 64 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 OR7C2O60412 319 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 TIGITQ495A1 244 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 C16orf82Q7Z2V1 217 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 LINC00305Q7Z4B0 112 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 MAPK1IP1LQ8NDC0 245 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 OR5AU1Q8NGC0 362 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 VN1R17PQ8TDU5 208 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 Q96MF0 132 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 SMIM7Q9BQ49 75 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 TMUB1Q9BVT8 246 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 NAT8Q9UHE5 227 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 PITPNC1Q9UKF7 332 aa10.13□□□□□ -0.79
SNX1-211ENST00000560829 NBPF19A0A087WUL8 3843 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 TRBV9A0A0B4J1U6 114 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 TRAV5A0A0B4J249 113 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 A0A1W2PRE2 83 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 M0QZK8 103 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 NDUFB8O95169 186 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 TOMM40O96008 361 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 RD3LP0DJH9 198 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 ORM2P19652 201 aa10.12□□□□□ -0.79
SNX1-211ENST00000560829 YPEL3P61236 119 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms