RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 IGLC1P0CG04 106 aa11.07□□□□□ -0.64
RABGGTA-211ENST00000559850 LAMTOR1Q6IAA8 161 aa11.07□□□□□ -0.64
RABGGTA-211ENST00000559850 LYG2Q86SG7 212 aa11.07□□□□□ -0.64
RABGGTA-211ENST00000559850 NPIPB3Q92617 1050 aa11.07□□□□□ -0.64
RABGGTA-211ENST00000559850 SPAG8Q99932 426 aaPredicted RBP11.07□□□□□ -0.64
RABGGTA-211ENST00000559850 FAM110AQ9BQ89 295 aa11.07□□□□□ -0.64
RABGGTA-211ENST00000559850 C20orf85Q9H1P6 137 aa11.07□□□□□ -0.64
RABGGTA-211ENST00000559850 PAIP2BQ9ULR5 123 aaKnown RBP11.07□□□□□ -0.64
RABGGTA-211ENST00000559850 TMED3Q9Y3Q3 217 aa11.07□□□□□ -0.64
RABGGTA-211ENST00000559850 TRAV6A0A075B6T7 132 aa11.06□□□□□ -0.64
RABGGTA-211ENST00000559850 WRBO00258 174 aa11.06□□□□□ -0.64
RABGGTA-211ENST00000559850 OR10J1P30954 320 aa11.06□□□□□ -0.64
RABGGTA-211ENST00000559850 TCF24Q7RTU0 167 aa11.06□□□□□ -0.64
RABGGTA-211ENST00000559850 GINS3Q9BRX5 216 aa11.06□□□□□ -0.64
RABGGTA-211ENST00000559850 CACFD1Q9UGQ2 172 aa11.06□□□□□ -0.64
RABGGTA-211ENST00000559850 U3KQ87 197 aa11.06□□□□□ -0.64
RABGGTA-211ENST00000559850 PIGBOS1A0A0B4J2F0 54 aa11.05□□□□□ -0.64
RABGGTA-211ENST00000559850 H3BP45 60 aa11.05□□□□□ -0.64
RABGGTA-211ENST00000559850 SLC25A4P12235 298 aa11.05□□□□□ -0.64
RABGGTA-211ENST00000559850 SLC25A6P12236 298 aa11.05□□□□□ -0.64
RABGGTA-211ENST00000559850 ZNF124Q15973 351 aa11.05□□□□□ -0.64
RABGGTA-211ENST00000559850 ODF3L2Q3SX64 289 aa11.05□□□□□ -0.64
RABGGTA-211ENST00000559850 FAM90A2PQ658T7 463 aa11.05□□□□□ -0.64
RABGGTA-211ENST00000559850 WFDC3Q8IUB2 231 aa11.05□□□□□ -0.64
RABGGTA-211ENST00000559850 OR1S2Q8NGQ3 325 aa11.05□□□□□ -0.64
RABGGTA-211ENST00000559850 COQ8AQ8NI60 647 aa11.05□□□□□ -0.64
RABGGTA-211ENST00000559850 TRAV30A0A087WSZ9 112 aa11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 OR4C46A6NHA9 309 aa11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 SYNGR2O43760 224 aa11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 DFFBO76075 338 aa11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 TCRBP04435 133 aa11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 POLR2GP62487 172 aaKnown RBP eCLIP11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 ETFRF1Q6IPR1 90 aa11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 NOXA1Q86UR1 476 aa11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 SPATA25Q9BR10 227 aa11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 CCDC32Q9BV29 185 aa11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 VSIRQ9H7M9 311 aa11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 TBC1D24Q9ULP9 559 aa11.04□□□□□ -0.64
RABGGTA-211ENST00000559850 FAM90A26D6RGX4 464 aa11.03□□□□□ -0.64
RABGGTA-211ENST00000559850 SCGB2A1O75556 95 aa11.03□□□□□ -0.64
RABGGTA-211ENST00000559850 MED6O75586 246 aa11.03□□□□□ -0.64
RABGGTA-211ENST00000559850 NPPCP23582 126 aa11.03□□□□□ -0.64
RABGGTA-211ENST00000559850 RPL11P62913 178 aaKnown RBP11.03□□□□□ -0.64
RABGGTA-211ENST00000559850 USF2Q15853 346 aaPredicted RBP11.03□□□□□ -0.64
RABGGTA-211ENST00000559850 APRG1Q8IVJ8 170 aa11.03□□□□□ -0.64
RABGGTA-211ENST00000559850 METTL26Q96S19 204 aa11.03□□□□□ -0.64
RABGGTA-211ENST00000559850 SEC22CQ9BRL7 303 aa11.03□□□□□ -0.64
RABGGTA-211ENST00000559850 NUDT15Q9NV35 164 aa11.03□□□□□ -0.64
RABGGTA-211ENST00000559850 CCSO14618 274 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 SCGB1D2O95969 90 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 IFNA21P01568 189 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 IL4P05112 153 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 RPL35AP18077 110 aaKnown RBP11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 GAMTQ14353 236 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 SPANXN5Q5MJ07 72 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 FAM24BQ8N5W8 94 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 Q8WTZ3 238 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 S100ZQ8WXG8 99 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 SLC35E1Q96K37 410 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 GGTLC1Q9BX51 225 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 PTTG2Q9NZH5 202 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 STAB2Q8WWQ8 2551 aa11.02□□□□□ -0.65
RABGGTA-211ENST00000559850 IGKV1D-37A0A075B6S9 117 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 LOC102724200A0A096LPH7 203 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 ZFP92A6NM28 416 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 SSSCA1O60232 199 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 PSG1P11464 419 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 CRYBB3P26998 211 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 GPX4P36969 197 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 P2RY1P47900 373 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 YPEL3P61236 119 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 RAB11AP62491 216 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 ID3Q02535 119 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 ZNF90Q03938 601 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 IAH1Q2TAA2 248 aaPredicted RBP11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 OR4D5Q8NGN0 318 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 MITD1Q8WV92 249 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 MS4A6AQ9H2W1 248 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 MAP6D1Q9H9H5 199 aa11.01□□□□□ -0.65
RABGGTA-211ENST00000559850 CCNKO75909 580 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 TOMM40O96008 361 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 H2AFB2P0C5Z0 115 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 RD3LP0DJH9 198 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 BMI1P35226 326 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 NKX2-1P43699 371 aaPredicted RBP11□□□□□ -0.65
RABGGTA-211ENST00000559850 IFITM3Q01628 133 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 OR2F1Q13607 317 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 ZNF846Q147U1 533 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 LINC00299Q6ZSB3 139 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 ZBTB8BQ8NAP8 495 aaPredicted RBP11□□□□□ -0.65
RABGGTA-211ENST00000559850 STXBP6Q8NFX7 210 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 OR51G1Q8NGK1 321 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 TMEM231Q9H6L2 316 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 GSKIPQ9P0R6 139 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 RABAC1Q9UI14 185 aa11□□□□□ -0.65
RABGGTA-211ENST00000559850 NBEAL2Q6ZNJ1 2754 aa10.99□□□□□ -0.65
RABGGTA-211ENST00000559850 FAM240BA0A1B0GVZ2 78 aa10.99□□□□□ -0.65
RABGGTA-211ENST00000559850 PRSS46E5RG02 174 aa10.99□□□□□ -0.65
RABGGTA-211ENST00000559850 DNASE2O00115 360 aaPredicted RBP10.99□□□□□ -0.65
RABGGTA-211ENST00000559850 HNRNPCP07910 306 aaKnown RBP eCLIP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms