RNA–Protein interactions for RNA: ENST00000558890.5

LRRC28-211, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 978 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-211ENST00000558890 STPG3Q8N7X2 389 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 OR4P4Q8NGL7 312 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 OR1L8Q8NGR8 309 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 SSMEM1Q8WWF3 244 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 ANAPC16Q96DE5 110 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 BTF3L4Q96K17 158 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 C12orf57Q99622 126 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 MEGF9Q9H1U4 602 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 DPM3Q9P2X0 92 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 WASHC3Q9Y3C0 194 aa6.15□□□□□ -1.42
LRRC28-211ENST00000558890 LSM4Q9Y4Z0 139 aaKnown RBP6.15□□□□□ -1.42
LRRC28-211ENST00000558890 TENM1Q9UKZ4 2725 aa6.15□□□□□ -1.43
LRRC28-211ENST00000558890 TRBV24-1A0A075B6N3 115 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 TRAV40A0A0B4J280 105 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 PPP1R2P9O14990 202 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 CLN5O75503 358 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 YIF1AO95070 293 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 IGKV1-16P04430 117 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 ARL14EPLP0DKL9 152 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 GCHFRP30047 84 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 MC5RP33032 325 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 GALR1P47211 349 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 SUB1P53999 127 aaKnown RBP eCLIP6.14□□□□□ -1.43
LRRC28-211ENST00000558890 LGALS4P56470 323 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 TAS2R45P59539 299 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 UBE2G2P60604 165 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 RPL15P61313 204 aaKnown RBP6.14□□□□□ -1.43
LRRC28-211ENST00000558890 RPL8P62917 257 aaKnown RBP6.14□□□□□ -1.43
LRRC28-211ENST00000558890 ARSJQ5FYB0 599 aaPredicted RBP6.14□□□□□ -1.43
LRRC28-211ENST00000558890 IL17RELQ6ZVW7 336 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 C16orf82Q7Z2V1 217 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 TMEM144Q7Z5S9 345 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 TGIF2LXQ8IUE1 241 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 TMEM86BQ8N661 226 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 OR5AN1Q8NGI8 311 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 OR4C13Q8NGP0 309 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 TMEM167AQ8TBQ9 72 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 GATAD1Q8WUU5 269 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 TMEM170AQ8WVE7 144 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 UHRF2Q96PU4 802 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 RNF5Q99942 180 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 NABP2Q9BQ15 211 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 SLC45A2Q9UMX9 530 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 CMYA5Q8N3K9 4069 aa6.14□□□□□ -1.43
LRRC28-211ENST00000558890 ELOA3CA0A087WX78 387 aaPredicted RBP6.13□□□□□ -1.43
LRRC28-211ENST00000558890 TEX50A0A1B0GTY4 177 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 MDFIC2A0A1B0GVS7 189 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 INS-IGF2F8WCM5 200 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 RNASE2P10153 161 aaKnown RBP6.13□□□□□ -1.43
LRRC28-211ENST00000558890 MYOD1P15172 320 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 S100A2P29034 98 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 SAA4P35542 130 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 SRP14P37108 136 aaKnown RBP6.13□□□□□ -1.43
LRRC28-211ENST00000558890 ATP5G3P48201 142 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 REG1BP48304 166 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 S100A12P80511 92 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 GCSAMLQ5JQS6 135 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 TPTE2P1Q5T6R2 138 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 SLC16A13Q7RTY0 426 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 PNKDQ8N490 385 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 RPEQ96AT9 228 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 RNF2Q99496 336 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 C19orf24Q9BVV8 132 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 TMEM167BQ9NRX6 74 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 TECRQ9NZ01 308 aaKnown RBP6.13□□□□□ -1.43
LRRC28-211ENST00000558890 DOK5Q9P104 306 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 ZNRD1Q9P1U0 126 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 FUT9Q9Y231 359 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 ARL2-SNX15V9GYD0 113 aa6.13□□□□□ -1.43
LRRC28-211ENST00000558890 PCP4L1A6NKN8 68 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 SRRM4A7MD48 611 aaKnown RBP6.12□□□□□ -1.43
LRRC28-211ENST00000558890 PPP5D1E7EU14 171 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 DEFA4P12838 97 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 OR10J1P30954 320 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 BRS3P32247 399 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 GPX4P36969 197 aaPredicted RBP6.12□□□□□ -1.43
LRRC28-211ENST00000558890 LGALS7P47929 136 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 NDUFA6P56556 154 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 GNB1P62873 340 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 CD69Q07108 199 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 EBI3Q14213 229 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 NECAP1Q8NC96 275 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 OR5R1Q8NH85 324 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 RNASEH2CQ8TDP1 164 aaKnown RBP6.12□□□□□ -1.43
LRRC28-211ENST00000558890 ABHD5Q8WTS1 349 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 CACNG8Q8WXS5 425 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 C22orf15Q8WYQ4 148 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 AJUBAQ96IF1 538 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 MRPL32Q9BYC8 188 aaKnown RBP6.12□□□□□ -1.43
LRRC28-211ENST00000558890 SRD5A3Q9H8P0 318 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 NDUFA4L2Q9NRX3 87 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 PITPNC1Q9UKF7 332 aa6.12□□□□□ -1.43
LRRC28-211ENST00000558890 SOX21Q9Y651 276 aaPredicted RBP6.12□□□□□ -1.43
LRRC28-211ENST00000558890 A0A1W2PPI3 338 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 ACTL6BO94805 426 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 NDUFB4O95168 129 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 TRGC2P03986 189 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 IGHV4-38-2P0DP08 117 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 HOXA5P20719 270 aa6.11□□□□□ -1.43
LRRC28-211ENST00000558890 COX7A1P24310 79 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 102.8 ms