RNA–Protein interactions for RNA: ENST00000557261.1

FOXN3-215, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-215ENST00000557261 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.73□□□□□ -1.65
FOXN3-215ENST00000557261 SIGLEC8Q9NYZ4 499 aa4.73□□□□□ -1.65
FOXN3-215ENST00000557261 OR5AC2Q9NZP5 309 aa4.73□□□□□ -1.65
FOXN3-215ENST00000557261 GSKIPQ9P0R6 139 aa4.73□□□□□ -1.65
FOXN3-215ENST00000557261 CACNG5Q9UF02 275 aa4.73□□□□□ -1.65
FOXN3-215ENST00000557261 ZNF257Q9Y2Q1 563 aa4.73□□□□□ -1.65
FOXN3-215ENST00000557261 WASHC3Q9Y3C0 194 aa4.73□□□□□ -1.65
FOXN3-215ENST00000557261 TBL2Q9Y4P3 447 aaKnown RBP4.73□□□□□ -1.65
FOXN3-215ENST00000557261 U3KQ87 197 aa4.73□□□□□ -1.65
FOXN3-215ENST00000557261 ABCA2Q9BZC7 2435 aa4.73□□□□□ -1.65
FOXN3-215ENST00000557261 CCDC168Q8NDH2 2452 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 A0A0G2JRQ6 117 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 LEUTXA8MZ59 168 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 LY6LH3BQJ8 138 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 BUB1B-PAK6H3BSN5 160 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 TEX46H3BTG2 121 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 SYNGR2O43760 224 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 ARG1P05089 322 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 TPT1P13693 172 aaKnown RBP4.72□□□□□ -1.65
FOXN3-215ENST00000557261 USF1P22415 310 aaPredicted RBP4.72□□□□□ -1.65
FOXN3-215ENST00000557261 RPL12P30050 165 aaKnown RBP4.72□□□□□ -1.65
FOXN3-215ENST00000557261 SAA4P35542 130 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 LGALS7P47929 136 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 GNG10P50151 68 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 LINC00205P59089 165 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 SPCS3P61009 180 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 ZNF266Q14584 549 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 HAGHQ16775 308 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 EIF5AL1Q6IS14 154 aaKnown RBP4.72□□□□□ -1.65
FOXN3-215ENST00000557261 FAM53AQ6NSI3 398 aaPredicted RBP4.72□□□□□ -1.65
FOXN3-215ENST00000557261 ATRAIDQ6UW56 229 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 NFE4Q86UQ8 179 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 STX12Q86Y82 276 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 UBAC2Q8NBM4 344 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 BPIFCQ8NFQ6 507 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 OR1B1Q8NGR6 318 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 OR5B3Q8NH48 314 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 LRRC20Q8TCA0 184 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 SMIM8Q96KF7 97 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 RBM14Q96PK6 669 aaKnown RBP4.72□□□□□ -1.65
FOXN3-215ENST00000557261 PARD6GQ9BYG4 376 aaPredicted RBP4.72□□□□□ -1.65
FOXN3-215ENST00000557261 Q9HAA7 133 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 TMEM14BQ9NUH8 114 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 FKBP11Q9NYL4 201 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 PRNDQ9UKY0 176 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 SPG11Q96JI7 2443 aa4.72□□□□□ -1.65
FOXN3-215ENST00000557261 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.72□□□□□ -1.65
FOXN3-215ENST00000557261 FBN3Q75N90 2809 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 VPS13CQ709C8 3753 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 A0A096LNT2 108 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 DNAJC9-AS1A6NH13 148 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 KCNAB3O43448 404 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 SSSCA1O60232 199 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 SOX15O60248 233 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 KBTBD11O94819 623 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 CRYZL1O95825 349 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 KRASP01116 189 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 HTR1DP28221 377 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 CD1BP29016 333 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 GPR183P32249 361 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 MAS1LP35410 378 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 G6PCP35575 357 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 SULT1A1P50225 295 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 UBE2E1P51965 193 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 UBE2KP61086 200 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 POLR2GP62487 172 aaKnown RBP eCLIP4.71□□□□□ -1.66
FOXN3-215ENST00000557261 PAX8Q06710 450 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 SSX2Q16385 188 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 UTF1Q5T230 341 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 HCP5Q6MZN7 132 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 TMEM14EPQ6UXP3 125 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 C19orf35Q6ZS72 473 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 ZNF680Q8NEM1 530 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 SCARB1Q8WTV0 552 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 LEAP2Q969E1 77 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 FLYWCH2Q96CP2 140 aaKnown RBP4.71□□□□□ -1.66
FOXN3-215ENST00000557261 C1QTNF4Q9BXJ3 329 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 MRPL20Q9BYC9 149 aaKnown RBP4.71□□□□□ -1.66
FOXN3-215ENST00000557261 ARV1Q9H2C2 271 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 MED9Q9NWA0 146 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 DPM3Q9P2X0 92 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 RPH3ALQ9UNE2 315 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 LSM5Q9Y4Y9 91 aaKnown RBP4.71□□□□□ -1.66
FOXN3-215ENST00000557261 CSDC2Q9Y534 153 aaKnown RBP4.71□□□□□ -1.66
FOXN3-215ENST00000557261 INSIG2Q9Y5U4 225 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 TET2Q6N021 2002 aaPredicted RBP4.71□□□□□ -1.66
FOXN3-215ENST00000557261 ARID1AO14497 2285 aa4.71□□□□□ -1.66
FOXN3-215ENST00000557261 PRRC2AP48634 2157 aaKnown RBP4.7□□□□□ -1.66
FOXN3-215ENST00000557261 IGHV1-3A0A0C4DH29 117 aa4.7□□□□□ -1.66
FOXN3-215ENST00000557261 A0A1W2PPE3 182 aa4.7□□□□□ -1.66
FOXN3-215ENST00000557261 MEX3AA1L020 520 aaKnown RBP4.7□□□□□ -1.66
FOXN3-215ENST00000557261 B4DSR2 109 aa4.7□□□□□ -1.66
FOXN3-215ENST00000557261 FNDC10F2Z333 226 aa4.7□□□□□ -1.66
FOXN3-215ENST00000557261 G3V4G9 280 aa4.7□□□□□ -1.66
FOXN3-215ENST00000557261 J3QLI3 93 aa4.7□□□□□ -1.66
FOXN3-215ENST00000557261 UPK2O00526 184 aa4.7□□□□□ -1.66
FOXN3-215ENST00000557261 IGKV1-16P04430 117 aa4.7□□□□□ -1.66
FOXN3-215ENST00000557261 DYNLT3P51808 116 aa4.7□□□□□ -1.66
FOXN3-215ENST00000557261 PAX9P55771 341 aa4.7□□□□□ -1.66
FOXN3-215ENST00000557261 LINC01547P58512 204 aaPredicted RBP4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms