RNA–Protein interactions for RNA: ENST00000556671.5

ATXN3-243, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 921 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-243ENST00000556671 SLC6A1P30531 599 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 SNCAP37840 140 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 CCR6P51684 374 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 SYNJ2BPP57105 145 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 DEFA1P59665 94 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 DEFA3P59666 94 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 ERHP84090 104 aaKnown RBP3.57□□□□□ -1.84
ATXN3-243ENST00000556671 DHODHQ02127 395 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 EXOSC2Q13868 293 aaKnown RBP3.57□□□□□ -1.84
ATXN3-243ENST00000556671 KIAA0141Q14154 515 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-243ENST00000556671 RPEL1Q2QD12 228 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 C15orf32Q32M92 178 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 C9orf66Q5T8R8 295 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 FAM122CQ6P4D5 195 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 PQLC2Q6ZP29 291 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 CCDC190Q86UF4 302 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 SELENOHQ8IZQ5 122 aaKnown RBP3.57□□□□□ -1.84
ATXN3-243ENST00000556671 SLC35G3Q8N808 338 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 GDPD1Q8N9F7 314 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 UXS1Q8NBZ7 420 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 MRAPQ8TCY5 172 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 DLX4Q92988 240 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-243ENST00000556671 EEF1AKMT3Q96AZ1 226 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 PINX1Q96BK5 328 aaKnown RBP3.57□□□□□ -1.84
ATXN3-243ENST00000556671 USMG5Q96IX5 58 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 SOSTQ9BQB4 213 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 CCDC32Q9BV29 185 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 NAA60Q9H7X0 242 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 COMMD9Q9P000 198 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 THYN1Q9P016 225 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 PRNDQ9UKY0 176 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 GPR132Q9UNW8 380 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 ZNF257Q9Y2Q1 563 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 V9GYH0 126 aa3.57□□□□□ -1.84
ATXN3-243ENST00000556671 VWFP04275 2813 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 TRAV34A0A0B4J273 112 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 hDV102S1A0JD36 115 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 FAM223BA6NKX1 122 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 H0Y980 276 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 H3BUA1 57 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 VCYO14598 125 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 ST8SIA3O43173 380 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 ATP6V1G1O75348 118 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 UPK1BO75841 260 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 DUS4LO95620 317 aaKnown RBP3.56□□□□□ -1.84
ATXN3-243ENST00000556671 IGKV1-39P01597 117 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 TRBV12-3P01733 135 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 IGKV1D-39P04432 117 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 ZP3P21754 424 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 HOXA1P49639 335 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-243ENST00000556671 CRIP2P52943 208 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-243ENST00000556671 SUB1P53999 127 aaKnown RBP eCLIP3.56□□□□□ -1.84
ATXN3-243ENST00000556671 RND3P61587 244 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 HSPE1P61604 102 aaKnown RBP3.56□□□□□ -1.84
ATXN3-243ENST00000556671 ZNF79Q15937 498 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 Q56UQ5 140 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 PLET1Q6UQ28 207 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 PET117Q6UWS5 81 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 RBPMS2Q6ZRY4 209 aaKnown RBP3.56□□□□□ -1.84
ATXN3-243ENST00000556671 LHFPL1Q86WI0 220 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 FAM223AQ8IWN6 122 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 NECAP1Q8NC96 275 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 WFDC9Q8NEX5 89 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 OR1S1Q8NH92 325 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 GLYATL2Q8WU03 294 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 GPR146Q96CH1 333 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 SEC22AQ96IW7 307 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 GPR61Q9BZJ8 451 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 SRRQ9GZT4 340 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 TMEM222Q9H0R3 208 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 C5orf66Q9H5L9 145 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 PLEKHA3Q9HB20 300 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-243ENST00000556671 FLVCR2Q9UPI3 526 aa3.56□□□□□ -1.84
ATXN3-243ENST00000556671 TRAV6A0A075B6T7 132 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 IGHV3OR16-8A0A075B7F1 116 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 TRBV7-1A0A0A6YYK4 115 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 A0A1B0GW64 132 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 NAP1L6A6NFF2 107 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 OR2T8A6NH00 312 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 CRYM-AS1A6NIL9 109 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 C15orf61A6NNL5 157 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 ZNF207O43670 478 aaKnown RBP3.55□□□□□ -1.84
ATXN3-243ENST00000556671 GGCTO75223 188 aaKnown RBP3.55□□□□□ -1.84
ATXN3-243ENST00000556671 YIF1AO95070 293 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 CDS2O95674 445 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 IFNA10P01566 189 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 IGKV1-5P01602 117 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 CFC1BP0CG36 223 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 CFC1P0CG37 223 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 IL7P13232 177 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 CTRB1P17538 263 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 GPR183P32249 361 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 SEC61BP60468 96 aaKnown RBP3.55□□□□□ -1.84
ATXN3-243ENST00000556671 RUNX1Q01196 453 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 WT1-ASQ06250 92 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 TMEM187Q14656 261 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 SURF2Q15527 256 aaPredicted RBP3.55□□□□□ -1.84
ATXN3-243ENST00000556671 POU2AF1Q16633 256 aa3.55□□□□□ -1.84
ATXN3-243ENST00000556671 GUCA2BQ16661 112 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms