RNA–Protein interactions for RNA: ENST00000556498.1

TDP1-215, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-215ENST00000556498 CCL20P78556 96 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 SP4Q02446 784 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 RPL18AQ02543 176 aaKnown RBP4.97□□□□□ -1.61
TDP1-215ENST00000556498 ZNF117Q03924 483 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 FHL3Q13643 280 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 RTL8BQ17RB0 113 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 STPG1Q5TH74 334 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 PQLC2Q6ZP29 291 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 TMEM150AQ86TG1 271 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 PIANPQ8IYJ0 282 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 CEND1Q8N111 149 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 DRAM1Q8N682 238 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 BORCS8Q96FH0 119 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 ABHD14BQ96IU4 210 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 LINC01600Q96MT4 127 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 EMC6Q9BV81 110 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 PHPT1Q9NRX4 125 aaPredicted RBP4.97□□□□□ -1.61
TDP1-215ENST00000556498 SERP1Q9Y6X1 66 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 TIAM2Q8IVF5 1701 aa4.97□□□□□ -1.61
TDP1-215ENST00000556498 BCORQ6W2J9 1755 aa4.96□□□□□ -1.61
TDP1-215ENST00000556498 SBF2Q86WG5 1849 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 IZUMO1RA6ND01 250 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 C17orf100A8MU93 164 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 J3QRE1 110 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 ATOX1O00244 68 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 PDCD6O75340 191 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 CST7O76096 145 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 NUDT14O95848 222 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 ACYP1P07311 99 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 HLA-DOBP13765 273 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 INSL3P51460 131 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 ZNF134P52741 427 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 CLDN17P56750 224 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 GTSCR1Q86UQ5 136 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 HAPLN4Q86UW8 402 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 PRR15Q8IV56 129 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 CHCHD1Q96BP2 118 aaKnown RBP4.96□□□□□ -1.62
TDP1-215ENST00000556498 SPRY4Q9C004 299 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 PDFQ9HBH1 243 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 IL36BQ9NZH7 164 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 GNG13Q9P2W3 67 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 RNF7Q9UBF6 113 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 ZNF256Q9Y2P7 627 aaPredicted RBP4.96□□□□□ -1.62
TDP1-215ENST00000556498 TNRC6AQ8NDV7 1962 aaKnown RBP4.96□□□□□ -1.62
TDP1-215ENST00000556498 TRPM7Q96QT4 1865 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 SCN1AP35498 2009 aa4.96□□□□□ -1.62
TDP1-215ENST00000556498 DUOX1Q9NRD9 1551 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 MYO18AQ92614 2054 aaKnown RBP4.95□□□□□ -1.62
TDP1-215ENST00000556498 COL11A2P13942 1736 aaPredicted RBP4.95□□□□□ -1.62
TDP1-215ENST00000556498 COL24A1Q17RW2 1714 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 ANK1P16157 1881 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 TRAV2A0A0B4J234 112 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 MDFIC2A0A1B0GVS7 189 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 TCRBV5S1A1TA0A578 114 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 KNCNA6PVL3 124 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 M0R129 80 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 CPSF4O95639 269 aaKnown RBP4.95□□□□□ -1.62
TDP1-215ENST00000556498 GYPBP06028 91 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 COX6A1P12074 109 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 CXCL5P42830 114 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 FBXW4P57775 412 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 FKBP1AP62942 108 aaKnown RBP4.95□□□□□ -1.62
TDP1-215ENST00000556498 SERF2P84101 59 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 FOXF2Q12947 444 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 LCE3BQ5TA77 95 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 Q6P435 159 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 TRAPPC6BQ86SZ2 158 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 OR5AS1Q8N127 324 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 ZPLD1Q8TCW7 415 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 ZNF503Q96F45 646 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 RPP25Q9BUL9 199 aaKnown RBP4.95□□□□□ -1.62
TDP1-215ENST00000556498 SAP30LQ9HAJ7 183 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 LSM4Q9Y4Z0 139 aaKnown RBP4.95□□□□□ -1.62
TDP1-215ENST00000556498 LY96Q9Y6Y9 160 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 CCDC88CQ9P219 2028 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 BRWD3Q6RI45 1802 aa4.95□□□□□ -1.62
TDP1-215ENST00000556498 COL1A1P02452 1464 aaPredicted RBP4.94□□□□□ -1.62
TDP1-215ENST00000556498 HELZP42694 1942 aaKnown RBP4.94□□□□□ -1.62
TDP1-215ENST00000556498 DENND4CQ5VZ89 1909 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 MYO10Q9HD67 2058 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 PIGBOS1A0A0B4J2F0 54 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 RBAKDNA6NC62 111 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 ZFP92A6NM28 416 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 NCBP2LA6PVI3 153 aaKnown RBP4.94□□□□□ -1.62
TDP1-215ENST00000556498 CEBPZOSA8MTT3 80 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 F5H697 171 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 TRIAP1O43715 76 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 EFNA2O43921 213 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 NDUFS7O75251 213 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 IGKCP01834 107 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 CA6P23280 308 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 HERV-K104P61576 105 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 NPC2P61916 151 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 QRFPP83859 136 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 PLPP4Q5VZY2 271 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 TRNP1Q6NT89 227 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 OR2A1Q8NGT9 310 aa4.94□□□□□ -1.62
TDP1-215ENST00000556498 PHLDA1Q8WV24 401 aaPredicted RBP4.94□□□□□ -1.62
TDP1-215ENST00000556498 SRSF12Q8WXF0 261 aaKnown RBP4.94□□□□□ -1.62
TDP1-215ENST00000556498 H1FXQ92522 213 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms