RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 MTURNQ8N3F0 131 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 ZNRF1Q8ND25 227 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 KIR2DL5BQ8NHK3 375 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 RFESDQ8TAC1 157 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 RASL10AQ92737 203 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 MARC2Q969Z3 335 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 GPR146Q96CH1 333 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 GNPNAT1Q96EK6 184 aaPredicted RBP4.02□□□□□ -1.77
SRP54-211ENST00000556445 SMIM8Q96KF7 97 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 GAFA1Q96PS6 74 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 FOXC2Q99958 501 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 ARV1Q9H2C2 271 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 CYTL1Q9NRR1 136 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.02□□□□□ -1.77
SRP54-211ENST00000556445 C19orf12Q9NSK7 152 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 TMEM106BQ9NUM4 274 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 CACNG5Q9UF02 275 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 PSG11Q9UQ72 335 aa4.02□□□□□ -1.77
SRP54-211ENST00000556445 PLCE1Q9P212 2302 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 RP1L1Q8IWN7 2480 aaPredicted RBP4.01□□□□□ -1.77
SRP54-211ENST00000556445 DSCAML1Q8TD84 2053 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 DSCAMO60469 2012 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 IGHV3OR15-7A0A075B7D8 119 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 ZNF705EA8MWA4 302 aaPredicted RBP4.01□□□□□ -1.77
SRP54-211ENST00000556445 A8MXK9 166 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 BUB3O43684 328 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 SSSCA1O60232 199 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 ZG16O60844 167 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 HRASP01112 189 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 GYPAP02724 150 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 OR8U8P0C7N1 319 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 C8orf88P0DMB2 117 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 IL3RAP26951 378 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 SSTR5P35346 364 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 SULT1A1P50225 295 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 RAB2AP61019 212 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 PAFAH1B2P68402 229 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 MRPS11P82912 194 aaKnown RBP4.01□□□□□ -1.77
SRP54-211ENST00000556445 EIF4EBP1Q13541 118 aaPredicted RBP4.01□□□□□ -1.77
SRP54-211ENST00000556445 RTL8BQ17RB0 113 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 KRTAP24-1Q3LI83 254 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 RPL7L1Q6DKI1 246 aaKnown RBP4.01□□□□□ -1.77
SRP54-211ENST00000556445 DPPA3Q6W0C5 159 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 HEPN1Q6WQI6 88 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 MUC15Q8N387 334 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 TMEM252Q8N6L7 170 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 DEFB108BQ8NET1 73 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 OR4S2Q8NH73 311 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 CCL17Q92583 94 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 FAM218AQ96MZ4 157 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 OR5B12Q96R08 314 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 TSNAXQ99598 290 aaKnown RBP4.01□□□□□ -1.77
SRP54-211ENST00000556445 CCL13Q99616 98 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 GINS3Q9BRX5 216 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 C11orf1Q9H5F2 150 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 PARP11Q9NR21 331 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 MMP26Q9NRE1 261 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 PSENENQ9NZ42 101 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 Q9UF83 564 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 RPUSD1Q9UJJ7 312 aaKnown RBP4.01□□□□□ -1.77
SRP54-211ENST00000556445 PCNX1Q96RV3 2341 aa4.01□□□□□ -1.77
SRP54-211ENST00000556445 ICE1Q9Y2F5 2266 aa4□□□□□ -1.77
SRP54-211ENST00000556445 SAA2-SAA4A0A096LPE2 208 aa4□□□□□ -1.77
SRP54-211ENST00000556445 IGHV3-43A0A0B4J1X8 118 aa4□□□□□ -1.77
SRP54-211ENST00000556445 FAM24AA6NFZ4 105 aa4□□□□□ -1.77
SRP54-211ENST00000556445 LYRM9A8MSI8 78 aa4□□□□□ -1.77
SRP54-211ENST00000556445 C17orf98A8MV24 154 aa4□□□□□ -1.77
SRP54-211ENST00000556445 DEFB108AA8MXU0 73 aa4□□□□□ -1.77
SRP54-211ENST00000556445 M0R1X1 148 aa4□□□□□ -1.77
SRP54-211ENST00000556445 ENSAO43768 121 aaKnown RBP4□□□□□ -1.77
SRP54-211ENST00000556445 KRASP01116 189 aa4□□□□□ -1.77
SRP54-211ENST00000556445 IGKV1-39P01597 117 aa4□□□□□ -1.77
SRP54-211ENST00000556445 IGKV1-5P01602 117 aa4□□□□□ -1.77
SRP54-211ENST00000556445 IGHV4-39P01824 125 aa4□□□□□ -1.77
SRP54-211ENST00000556445 APOA2P02652 100 aa4□□□□□ -1.77
SRP54-211ENST00000556445 RBP4P02753 201 aa4□□□□□ -1.77
SRP54-211ENST00000556445 IGKV1D-39P04432 117 aa4□□□□□ -1.77
SRP54-211ENST00000556445 P0C879 139 aa4□□□□□ -1.77
SRP54-211ENST00000556445 CT45A6P0DMU7 189 aa4□□□□□ -1.77
SRP54-211ENST00000556445 CT45A5P0DMU8 189 aa4□□□□□ -1.77
SRP54-211ENST00000556445 CT45A7P0DMV0 189 aa4□□□□□ -1.77
SRP54-211ENST00000556445 IGHV3-43DP0DP04 118 aa4□□□□□ -1.77
SRP54-211ENST00000556445 OMGP23515 440 aa4□□□□□ -1.77
SRP54-211ENST00000556445 SPCS3P61009 180 aa4□□□□□ -1.77
SRP54-211ENST00000556445 RAB4BP61018 213 aa4□□□□□ -1.77
SRP54-211ENST00000556445 SERF2P84101 59 aa4□□□□□ -1.77
SRP54-211ENST00000556445 TNFRSF9Q07011 255 aa4□□□□□ -1.77
SRP54-211ENST00000556445 ZNF816Q0VGE8 651 aaPredicted RBP4□□□□□ -1.77
SRP54-211ENST00000556445 C17orf58Q2M2W7 97 aa4□□□□□ -1.77
SRP54-211ENST00000556445 CT45A1Q5HYN5 189 aa4□□□□□ -1.77
SRP54-211ENST00000556445 OR10J3Q5JRS4 329 aa4□□□□□ -1.77
SRP54-211ENST00000556445 SMIM15Q7Z3B0 74 aa4□□□□□ -1.77
SRP54-211ENST00000556445 LINC00311Q8N616 119 aa4□□□□□ -1.77
SRP54-211ENST00000556445 CT45A3Q8NHU0 189 aa4□□□□□ -1.77
SRP54-211ENST00000556445 C11orf45Q8TAV5 145 aa4□□□□□ -1.77
SRP54-211ENST00000556445 UBALD1Q8TB05 177 aa4□□□□□ -1.77
SRP54-211ENST00000556445 LINC01560Q8TB33 94 aa4□□□□□ -1.77
SRP54-211ENST00000556445 SCGB1C1Q8TD33 95 aa4□□□□□ -1.77
SRP54-211ENST00000556445 GATAD1Q8WUU5 269 aa4□□□□□ -1.77
SRP54-211ENST00000556445 ZNF714Q96N38 554 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms