RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 A0A0A6YYH2 397 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 EXOC1LA0A1B0GW35 172 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 A6NJ64 397 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 M0R378 163 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 INE1O15225 51 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 GADD45GO95257 159 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 KRT75O95678 551 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 CALB1P05937 261 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 C8orf88P0DMB2 117 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 SPCS3P61009 180 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 SNRPD2P62316 118 aaKnown RBP0.09□□□□□ -2.4
SRP54-207ENST00000555535 TPM4P67936 248 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 PSG9Q00887 426 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 FAM151BQ6UXP7 276 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 ALKAL1Q6UXT8 129 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 LCA10Q71F78 164 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 TRAPPC6BQ86SZ2 158 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 KRT222Q8N1A0 295 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 OR11H6Q8NGC7 330 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 OR13D1Q8NGV5 346 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 TSKUQ8WUA8 353 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 SLC35B4Q969S0 331 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 SMR3AQ99954 134 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 C10orf95Q9H7T3 257 aa0.09□□□□□ -2.4
SRP54-207ENST00000555535 PIK3R4Q99570 1358 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 MUC4Q99102 2169 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 ARHGEF28Q8N1W1 1705 aaKnown RBP0.08□□□□□ -2.4
SRP54-207ENST00000555535 WRNQ14191 1432 aaPredicted RBP eCLIP0.08□□□□□ -2.4
SRP54-207ENST00000555535 TLCD2A6NGC4 264 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 M0R2N4 97 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 PIRO00625 290 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 SLC16A4O15374 487 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 TGOLN2O43493 480 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 OR2B3O76000 313 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 IFNA10P01566 189 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 ISG15P05161 165 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 SMIM17P0DL12 118 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 CD79AP11912 226 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 COX6A1P12074 109 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 SRSF6Q13247 344 aaKnown RBP0.08□□□□□ -2.4
SRP54-207ENST00000555535 MED21Q13503 144 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 ESRGQ1W209 222 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 LINC01554Q52M75 96 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 CD200R1LQ6Q8B3 271 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 LRRC25Q8N386 305 aaPredicted RBP0.08□□□□□ -2.4
SRP54-207ENST00000555535 ST6GALNAC3Q8NDV1 305 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 OR13C4Q8NGS5 318 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 OR10J5Q8NHC4 309 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 WFDC5Q8TCV5 224 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 DDI1Q8WTU0 396 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 TOMM6Q96B49 74 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 LLPHQ9BRT6 129 aaKnown RBP0.08□□□□□ -2.4
SRP54-207ENST00000555535 MRPS26Q9BYN8 205 aaKnown RBP0.08□□□□□ -2.4
SRP54-207ENST00000555535 PSTPIP2Q9H939 334 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 UCK1Q9HA47 277 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 C14orf105Q9NVL8 296 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 USE1Q9NZ43 259 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 MYO3BQ8WXR4 1341 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 NUP98P52948 1817 aa0.08□□□□□ -2.4
SRP54-207ENST00000555535 MED1Q15648 1581 aaPredicted RBP0.07□□□□□ -2.4
SRP54-207ENST00000555535 RIMBP3CA6NJZ7 1639 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 RIMBP3BA6NNM3 1639 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 RIMBP3Q9UFD9 1639 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 FAM236DA0A1B0GTK5 79 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 TRBV6-4A0A1B0GX49 114 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 OR4C46A6NHA9 309 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 FAM25EA8MYX2 175 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 GOLGA6L19H0YKK7 550 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 AHSA1O95433 338 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 SERPINE1P05121 402 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 OR4E1P0C645 316 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 KRTAP2-3P0C7H8 128 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 FAM236CP0DP71 79 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 CASP1P29466 404 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 SPINT3P49223 89 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 RAB5BP61020 215 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 CDKL4Q5MAI5 379 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 LINC00322Q6ZN03 302 aaPredicted RBP0.07□□□□□ -2.4
SRP54-207ENST00000555535 TMEM86BQ8N661 226 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 OR8D4Q8NGM9 314 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 OR2T35Q8NGX2 323 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 TMEM254Q8TBM7 123 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 HIST1H2BLQ99880 126 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 NIPSNAP1Q9BPW8 284 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 KRTAP2-4Q9BYR9 128 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 KRTAP2-1Q9BYU5 128 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 CCDC90BQ9GZT6 254 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 DCSTAMPQ9H295 470 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 BCL2L10Q9HD36 194 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 NKIRAS1Q9NYS0 192 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 GUCA1BQ9UMX6 200 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 CYSLTR1Q9Y271 337 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 ATP6V1DQ9Y5K8 247 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 TMEM56-RWDD3S4R434 201 aa0.07□□□□□ -2.4
SRP54-207ENST00000555535 UBR2Q8IWV8 1755 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 KNTC1P50748 2209 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 FAT4Q6V0I7 4981 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 TRAV23DV6A0A075B6W5 121 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 A0A087X0T9 212 aa0.06□□□□□ -2.4
SRP54-207ENST00000555535 A0A0D9SG42 100 aa0.06□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms