RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 CORTO00230 105 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 GATA4P43694 442 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 OR9G1Q8NH87 305 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 OR4C12Q96R67 309 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 THYN1Q9P016 225 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 ARFGEF3Q5TH69 2177 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 PRB1P04280 392 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 RND2P52198 227 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 SLC25A34Q6PIV7 304 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 NMSQ5H8A3 153 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 PRR31Q5SQ13 230 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 SLC45A2Q9UMX9 530 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 MMP23AO75900 390 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 PFN1P07737 140 aaKnown RBP13.59□□□□□ -0.23
PCNX1-209ENST00000554879 LCN2P80188 198 aa13.59□□□□□ -0.23
PCNX1-209ENST00000554879 RPUSD1Q9UJJ7 312 aaKnown RBP13.59□□□□□ -0.23
PCNX1-209ENST00000554879 TMEM147Q9BVK8 224 aa13.58□□□□□ -0.24
PCNX1-209ENST00000554879 CREBBPQ92793 2442 aa13.58□□□□□ -0.24
PCNX1-209ENST00000554879 MUC21A0A0G2JKD1 596 aa13.58□□□□□ -0.24
PCNX1-209ENST00000554879 MUC21A0A140T8X8 626 aa13.58□□□□□ -0.24
PCNX1-209ENST00000554879 RBFOX2O43251 390 aaKnown RBP eCLIP13.58□□□□□ -0.24
PCNX1-209ENST00000554879 ID3Q02535 119 aa13.58□□□□□ -0.24
PCNX1-209ENST00000554879 MEF2CQ06413 473 aaPredicted RBP13.58□□□□□ -0.24
PCNX1-209ENST00000554879 ZNF585BQ52M93 769 aa13.58□□□□□ -0.24
PCNX1-209ENST00000554879 ACTL10Q5JWF8 245 aa13.58□□□□□ -0.24
PCNX1-209ENST00000554879 MUC21Q5SSG8 566 aa13.58□□□□□ -0.24
PCNX1-209ENST00000554879 TMEM242Q9NWH2 141 aa13.58□□□□□ -0.24
PCNX1-209ENST00000554879 LOC105371242A0A075B767 164 aa13.58□□□□□ -0.24
PCNX1-209ENST00000554879 IGHV3-21A0A0B4J1V1 117 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 CSN3P07498 182 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 IGLC2P0DOY2 106 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 IGLC3P0DOY3 106 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 NPY1RP25929 384 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 OPRK1P41145 380 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 SUB1P53999 127 aaKnown RBP eCLIP13.57□□□□□ -0.24
PCNX1-209ENST00000554879 PMCHL2Q9BQD1 86 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 FBXL7Q9UJT9 491 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 TCF19Q9Y242 345 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 IGHV3-48P01763 117 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 CFHR2P36980 270 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 RPEL1Q2QD12 228 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 OR5B3Q8NH48 314 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 LIPFP07098 398 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 RAB9AP51151 201 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 ATP5J2P56134 94 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 BPIFA4PQ86YQ2 179 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 PRNDQ9UKY0 176 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 PAX2Q02962 417 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 LINC01551Q86U37 167 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 P2RX4Q99571 388 aa13.57□□□□□ -0.24
PCNX1-209ENST00000554879 PMCHL1Q16048 86 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 TM4SF20Q53R12 229 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 DYSFO75923 2080 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 MAS1LP35410 378 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 FXYD3Q14802 87 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 OR1B1Q8NGR6 318 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 AMMECR1Q9Y4X0 333 aaPredicted RBP13.56□□□□□ -0.24
PCNX1-209ENST00000554879 ZNF462Q96JM2 2506 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 IGHV2-70DA0A0C4DH43 119 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 NPIPB11E5RHQ5 1161 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 OR9G9P0C7N8 305 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 CD24P25063 80 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 VSTM2AQ8TAG5 236 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 CLEC7AQ9BXN2 247 aa13.56□□□□□ -0.24
PCNX1-209ENST00000554879 IGHV3OR16-10A0A075B7F0 116 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 NDUFS7O75251 213 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 ZNF134P52741 427 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 TIGITQ495A1 244 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 PDE6DO43924 150 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 OR10J4P0C629 311 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 ARL3P36405 182 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 CEACAM3P40198 252 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 MRPL52Q86TS9 123 aaKnown RBP13.55□□□□□ -0.24
PCNX1-209ENST00000554879 NEU4Q8WWR8 484 aaPredicted RBP13.55□□□□□ -0.24
PCNX1-209ENST00000554879 DAZAP2Q15038 168 aaPredicted RBP13.55□□□□□ -0.24
PCNX1-209ENST00000554879 TNCP24821 2201 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 C7orf71A4D174 169 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 C15orf65H3BRN8 121 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 IGKV1-39P01597 117 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 IGKV1D-39P04432 117 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 REG1AP05451 166 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 HCP5Q6MZN7 132 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 STXBP6Q8NFX7 210 aa13.55□□□□□ -0.24
PCNX1-209ENST00000554879 SSBP3Q9BWW4 388 aaPredicted RBP13.55□□□□□ -0.24
PCNX1-209ENST00000554879 USP9YO00507 2555 aaPredicted RBP13.55□□□□□ -0.24
PCNX1-209ENST00000554879 TRAV3A0A0B4J244 114 aa13.54□□□□□ -0.24
PCNX1-209ENST00000554879 K7EP13 123 aa13.54□□□□□ -0.24
PCNX1-209ENST00000554879 NDUFB8O95169 186 aa13.54□□□□□ -0.24
PCNX1-209ENST00000554879 HTR1DP28221 377 aa13.54□□□□□ -0.24
PCNX1-209ENST00000554879 PSG9Q00887 426 aa13.54□□□□□ -0.24
PCNX1-209ENST00000554879 PERPQ96FX8 193 aa13.54□□□□□ -0.24
PCNX1-209ENST00000554879 COL27A1Q8IZC6 1860 aaPredicted RBP13.54□□□□□ -0.24
PCNX1-209ENST00000554879 HSPE1P61604 102 aaKnown RBP13.54□□□□□ -0.24
PCNX1-209ENST00000554879 RPL8P62917 257 aaKnown RBP13.54□□□□□ -0.24
PCNX1-209ENST00000554879 IFI27L2Q9H2X8 130 aa13.54□□□□□ -0.24
PCNX1-209ENST00000554879 C3orf79P0CE67 100 aa13.54□□□□□ -0.24
PCNX1-209ENST00000554879 FER1L6-AS1Q8NA97 138 aa13.54□□□□□ -0.24
PCNX1-209ENST00000554879 OR1L8Q8NGR8 309 aa13.54□□□□□ -0.24
PCNX1-209ENST00000554879 Q8TCH9 128 aa13.54□□□□□ -0.24
PCNX1-209ENST00000554879 SFRP2Q96HF1 295 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms