RNA–Protein interactions for RNA: ENST00000554819.5

SCFD1-214, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-214ENST00000554819 SPOPLQ6IQ16 392 aa0.3□□□□□ -2.36
SCFD1-214ENST00000554819 TMEM86BQ8N661 226 aa0.3□□□□□ -2.36
SCFD1-214ENST00000554819 OR13D1Q8NGV5 346 aa0.3□□□□□ -2.36
SCFD1-214ENST00000554819 TEX47Q8TBZ9 253 aa0.3□□□□□ -2.36
SCFD1-214ENST00000554819 LLPHQ9BRT6 129 aaKnown RBP0.3□□□□□ -2.36
SCFD1-214ENST00000554819 OSTCQ9NRP0 149 aa0.3□□□□□ -2.36
SCFD1-214ENST00000554819 DOPEY1Q5JWR5 2465 aa0.3□□□□□ -2.36
SCFD1-214ENST00000554819 NAV2Q8IVL1 2488 aa0.3□□□□□ -2.36
SCFD1-214ENST00000554819 NCOR2Q9Y618 2525 aa0.3□□□□□ -2.36
SCFD1-214ENST00000554819 ABCA2Q9BZC7 2435 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 SNAPC4Q5SXM2 1469 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 RNF213Q63HN8 5207 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 FAAHO00519 579 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 CETN3O15182 167 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 TGOLN2O43493 480 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 CRYZL1O95825 349 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 RPL5P46777 297 aaKnown RBP0.29□□□□□ -2.36
SCFD1-214ENST00000554819 EFNA4P52798 201 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 YPEL3P61236 119 aaPredicted RBP0.29□□□□□ -2.36
SCFD1-214ENST00000554819 PSG9Q00887 426 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 FAM74A1Q5RGS3 127 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 GKN2Q86XP6 184 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 TSPAN32Q96QS1 320 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 SSPOA2VEC9 5147 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 SPTBN4Q9H254 2564 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 CHD8Q9HCK8 2581 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 FLNAP21333 2647 aaKnown RBP0.29□□□□□ -2.36
SCFD1-214ENST00000554819 SBF1O95248 1867 aa0.29□□□□□ -2.36
SCFD1-214ENST00000554819 FAT4Q6V0I7 4981 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 COL6A5A8TX70 2615 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 ANKRD17O75179 2603 aaKnown RBP0.28□□□□□ -2.36
SCFD1-214ENST00000554819 SETXQ7Z333 2677 aaKnown RBP0.28□□□□□ -2.36
SCFD1-214ENST00000554819 NSD1Q96L73 2696 aaPredicted RBP0.28□□□□□ -2.36
SCFD1-214ENST00000554819 TRAV3A0A0B4J244 114 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 C7orf71A4D174 169 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 DNAL4O96015 105 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 HIST1H1EP10412 219 aaKnown RBP0.28□□□□□ -2.36
SCFD1-214ENST00000554819 OR2F1Q13607 317 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 DEFB113Q30KQ7 82 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 C20orf27Q9GZN8 174 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 EPDR1Q9UM22 224 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 TAF1LQ8IZX4 1826 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 NAV3Q8IVL0 2385 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 MYO3BQ8WXR4 1341 aa0.28□□□□□ -2.36
SCFD1-214ENST00000554819 SETD2Q9BYW2 2564 aaPredicted RBP0.28□□□□□ -2.37
SCFD1-214ENST00000554819 PDZD2O15018 2839 aa0.28□□□□□ -2.37
SCFD1-214ENST00000554819 HYDINQ4G0P3 5121 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 CREBBPQ92793 2442 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 DENND4CQ5VZ89 1909 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 TENM4Q6N022 2769 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 OR2J2O76002 312 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 PRH1P02810 166 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 OR4E1P0C645 316 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 SULT1A1P50225 295 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 CDKL4Q5MAI5 379 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 LINC00301Q8NCQ3 95 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 PPP1R2P1Q96PQ5 205 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 DCSTAMPQ9H295 470 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 OR51V1Q9H2C8 321 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 C14orf132Q9NPU4 83 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 V9GYY5 206 aaPredicted RBP0.27□□□□□ -2.37
SCFD1-214ENST00000554819 WRNQ14191 1432 aaPredicted RBP eCLIP0.27□□□□□ -2.37
SCFD1-214ENST00000554819 KCPQ6ZWJ8 1503 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 ABCA12Q86UK0 2595 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 HECTD1Q9ULT8 2610 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 ANKRD11Q6UB99 2663 aaPredicted RBP0.27□□□□□ -2.37
SCFD1-214ENST00000554819 ZNF292O60281 2723 aa0.27□□□□□ -2.37
SCFD1-214ENST00000554819 ASCC3Q8N3C0 2202 aaKnown RBP0.26□□□□□ -2.37
SCFD1-214ENST00000554819 FASNP49327 2511 aaKnown RBP0.26□□□□□ -2.37
SCFD1-214ENST00000554819 USP9XQ93008 2570 aaPredicted RBP0.26□□□□□ -2.37
SCFD1-214ENST00000554819 ASH1LQ9NR48 2969 aaKnown RBP0.26□□□□□ -2.37
SCFD1-214ENST00000554819 HMCN2Q8NDA2 5059 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 PIRO00625 290 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 CCL25O15444 150 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 RBP1P09455 135 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 SMIM10L2AP0DMW4 78 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 SMIM10L2BP0DMW5 78 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 RPS20P60866 119 aaKnown RBP0.26□□□□□ -2.37
SCFD1-214ENST00000554819 COTL1Q14019 142 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 ESRGQ1W209 222 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 ACOT6Q3I5F7 207 aaPredicted RBP0.26□□□□□ -2.37
SCFD1-214ENST00000554819 LINC01554Q52M75 96 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 SPRNQ5BIV9 151 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 BRMS1LQ5PSV4 323 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 CCDC122Q5T0U0 273 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 LINC00322Q6ZN03 302 aaPredicted RBP0.26□□□□□ -2.37
SCFD1-214ENST00000554819 LCA10Q71F78 164 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 CLECL1Q8IZS7 167 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 KRT222Q8N1A0 295 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 DCUN1D1Q96GG9 259 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 SMR3AQ99954 134 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 C6orf62Q9GZU0 229 aaPredicted RBP0.26□□□□□ -2.37
SCFD1-214ENST00000554819 GUCA1BQ9UMX6 200 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 PKIGQ9Y2B9 76 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 NEO1Q92859 1461 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 DOCK5Q9H7D0 1870 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 DOCK3Q8IZD9 2030 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 SONP18583 2426 aaKnown RBP0.26□□□□□ -2.37
SCFD1-214ENST00000554819 HIVEP3Q5T1R4 2406 aa0.26□□□□□ -2.37
SCFD1-214ENST00000554819 CCDC168Q8NDH2 2452 aa0.26□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms