RNA–Protein interactions for RNA: ENST00000554350.5

ATXN3-226, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-226ENST00000554350 C11orf53Q8IXP5 236 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 DRAM1Q8N682 238 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 ZNF645Q8N7E2 425 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 OR13D1Q8NGV5 346 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 OR2G3Q8NGZ4 309 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 C4orf3Q8WVX3 66 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 MBD3L1Q8WWY6 194 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 PINX1Q96BK5 328 aaKnown RBP4.29□□□□□ -1.72
ATXN3-226ENST00000554350 CIB3Q96Q77 187 aaPredicted RBP4.29□□□□□ -1.72
ATXN3-226ENST00000554350 IL36RNQ9UBH0 155 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 PRELID3BQ9Y3B1 194 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 TIMM9Q9Y5J7 89 aa4.29□□□□□ -1.72
ATXN3-226ENST00000554350 A0A087WWC5 75 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 IGLV5-39A0A0G2JS06 123 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 B4DEV8 164 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 HSD17B6O14756 317 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 RAB29O14966 203 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 RBFOX2O43251 390 aaKnown RBP eCLIP4.28□□□□□ -1.72
ATXN3-226ENST00000554350 CNIH1O95406 144 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 TMEM50AO95807 157 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 IGKV1-39P01597 117 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 PRH1P02810 166 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 MT-ND4LP03901 98 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 IGKV1D-39P04432 117 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 P0C879 139 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 CCL3L1P16619 93 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 BRS3P32247 399 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 CEACAM6P40199 344 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 HOXA1P49639 335 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-226ENST00000554350 SMIM21Q3B7S5 101 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 ODF3L2Q3SX64 289 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 KHDC3LQ587J8 217 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 ZNF506Q5JVG8 444 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 LDLRAD2Q5SZI1 272 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 AKR1C8PQ5T2L2 129 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 STUMQ69YW2 141 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 WDR82Q6UXN9 313 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 GTSCR1Q86UQ5 136 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 ODF3L1Q8IXM7 274 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 OR5C1Q8NGR4 320 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 OR1N2Q8NGR9 330 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 BSCL2Q96G97 398 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-226ENST00000554350 RBM14Q96PK6 669 aaKnown RBP4.28□□□□□ -1.72
ATXN3-226ENST00000554350 GAFA1Q96PS6 74 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 OR5B12Q96R08 314 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 OR4C12Q96R67 309 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 HSD17B10Q99714 261 aaKnown RBP4.28□□□□□ -1.72
ATXN3-226ENST00000554350 SMIM3Q9BZL3 60 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.28□□□□□ -1.72
ATXN3-226ENST00000554350 HSPB7Q9UBY9 170 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 JPT1Q9UK76 154 aa4.28□□□□□ -1.72
ATXN3-226ENST00000554350 A0A0J9YWU9 116 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 RBFOX3A6NFN3 312 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 COLCA2A8K830 154 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 C9JQL5 133 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 M0QZK8 103 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 SPINT2O43291 252 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 SSSCA1O60232 199 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 YPEL1O60688 119 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 IGKV1-5P01602 117 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 MBP02144 154 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 IFNA4P05014 189 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 PSG2P11465 335 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 KIR2DS2P43631 304 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 CDX1P47902 265 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-226ENST00000554350 NPBWR1P48145 328 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 AKR1C2P52895 323 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 RPL31P62899 125 aaKnown RBP4.27□□□□□ -1.73
ATXN3-226ENST00000554350 AKR1C1Q04828 323 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 ZNF616Q08AN1 781 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 PNRC1Q12796 327 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-226ENST00000554350 CLINT1Q14677 625 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 VWC2Q2TAL6 325 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 SPSB3Q6PJ21 355 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 TMEM14EPQ6UXP3 125 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 SLC35E3Q7Z769 313 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 ZNF561Q8N587 486 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-226ENST00000554350 HSD17B11Q8NBQ5 300 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.27□□□□□ -1.73
ATXN3-226ENST00000554350 ZNRF1Q8ND25 227 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 OR52E5Q8NH55 327 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 OR51H1Q8NH63 302 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 SCGB1C1Q8TD33 95 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 ARPC1AQ92747 370 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 SNX22Q96L94 193 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 ZNF488Q96MN9 340 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 YPEL2Q96QA6 119 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 GGACTQ9BVM4 153 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 EIF5A2Q9GZV4 153 aaKnown RBP4.27□□□□□ -1.73
ATXN3-226ENST00000554350 LINC00574Q9H8X3 128 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 BIN3Q9NQY0 253 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 TMEM242Q9NWH2 141 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 PSENENQ9NZ42 101 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 OR1A1Q9P1Q5 309 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 MLXQ9UH92 298 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 PRELID1Q9Y255 219 aa4.27□□□□□ -1.73
ATXN3-226ENST00000554350 RBM7Q9Y580 266 aaKnown RBP4.27□□□□□ -1.73
ATXN3-226ENST00000554350 SRRM2Q9UQ35 2752 aaKnown RBP4.26□□□□□ -1.73
ATXN3-226ENST00000554350 A0A0G2JRQ6 117 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms