RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 NPCDR1Q9BY65 106 aa8.17□□□□□ -1.1
TMEM55B-205ENST00000554028 SERTAD4Q9NUC0 356 aa8.17□□□□□ -1.1
TMEM55B-205ENST00000554028 AKAP9Q99996 3911 aa8.17□□□□□ -1.1
TMEM55B-205ENST00000554028 TNCP24821 2201 aa8.17□□□□□ -1.1
TMEM55B-205ENST00000554028 TCRBV4S1A1TA0A5B7 111 aa8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 TSPAN15O95858 294 aa8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 CFDP00746 253 aaPredicted RBP8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 MDKP21741 143 aaPredicted RBP8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 FCGR2BP31994 310 aaPredicted RBP8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 RPL29P47914 159 aaKnown RBP8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 RUNX1Q01196 453 aa8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 ACOT6Q3I5F7 207 aaPredicted RBP8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 ALKAL2Q6UX46 152 aa8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 CYP2G1PQ6ZSU1 146 aa8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 KLHDC1Q8N7A1 406 aa8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 THAP8Q8NA92 274 aa8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 LRRC20Q8TCA0 184 aa8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 RNF141Q8WVD5 230 aa8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 RSG1Q9BU20 258 aa8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 LSM4Q9Y4Z0 139 aaKnown RBP8.16□□□□□ -1.1
TMEM55B-205ENST00000554028 TET2Q6N021 2002 aaPredicted RBP8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 HIVEP1P15822 2718 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 A0A1B0GUS0 222 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 MFSD2BA6NFX1 497 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 CLEC3BP05452 202 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 RD3LP0DJH9 198 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 PSMB8P28062 276 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 ZNF616Q08AN1 781 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 FFAR4Q5NUL3 377 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 SPSB3Q6PJ21 355 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 TMEM182Q6ZP80 229 aaPredicted RBP8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 S100A7AQ86SG5 101 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 BPIFCQ8NFQ6 507 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 OR5AU1Q8NGC0 362 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 ZNF502Q8TBZ5 544 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 Q8WTZ3 238 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 MGST2Q99735 147 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 GGTLC1Q9BX51 225 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 SH3BGRL3Q9H299 93 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 KLK15Q9H2R5 256 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 SLC45A2Q9UMX9 530 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 PXMP4Q9Y6I8 212 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 S4R3C0 116 aa8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 SONP18583 2426 aaKnown RBP8.15□□□□□ -1.1
TMEM55B-205ENST00000554028 CLPSL1A2RUU4 121 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 OR2T8A6NH00 312 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 IGHV3-23P01764 117 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 IGLC1P0CG04 106 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 LORP23490 312 aaPredicted RBP8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 S100A7P31151 101 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 ELLP55199 621 aaPredicted RBP8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 YPEL3P61236 119 aaPredicted RBP8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 B2MP61769 119 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 RELQ04864 619 aaPredicted RBP8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 PXDC1Q5TGL8 231 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 CLEC19AQ6UXS0 136 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 DPPA3Q6W0C5 159 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 LINC01006Q8NI28 216 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 GNB4Q9HAV0 340 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 SLC39A9Q9NUM3 307 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 MRPL36Q9P0J6 103 aaKnown RBP8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 RNF114Q9Y508 228 aa8.14□□□□□ -1.11
TMEM55B-205ENST00000554028 CELSR1Q9NYQ6 3014 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 A0A1W2PPV4 95 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 TEX46H3BTG2 121 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 IGHV3-11P01762 117 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 M6PRP20645 277 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 GPR183P32249 361 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 SULT1A2P50226 295 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 RAB2AP61019 212 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 BLOC1S1P78537 153 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 DEFA5Q01523 94 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 IFITM2Q01629 132 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 TIGITQ495A1 244 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 TMEM41BQ5BJD5 291 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 MIC13Q5XKP0 118 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 ZNF343Q6P1L6 599 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 STPG3Q8N7X2 389 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 OR51G1Q8NGK1 321 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 OR10G4Q8NGN3 311 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 OR10G9Q8NGN4 311 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 OR10G7Q8NGN6 311 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 OR1L4Q8NGR5 311 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 UBE2E2Q96LR5 201 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 RNF2Q99496 336 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 C19orf24Q9BVV8 132 aa8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 ACTR3CQ9C0K3 210 aaPredicted RBP8.13□□□□□ -1.11
TMEM55B-205ENST00000554028 PLXNB1O43157 2135 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 MXRA5Q9NR99 2828 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 IGKV1D-37A0A075B6S9 117 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 IGKV1OR2-108A0A075B7D4 117 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 ELOA3CA0A087WX78 387 aaPredicted RBP8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 ZNF705EA8MWA4 302 aaPredicted RBP8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 RGS13O14921 159 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 TGOLN2O43493 480 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 COX7A2P2O60397 106 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 YIF1AO95070 293 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 TOMM40O96008 361 aa8.12□□□□□ -1.11
TMEM55B-205ENST00000554028 RPLP1P05386 114 aaKnown RBP8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms