RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 DSCR10P59022 87 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 TAS2R43P59537 309 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 TPBGQ13641 420 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 SPHARQ15513 63 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 RAB11BQ15907 218 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 CDNFQ49AH0 187 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 SPINK9Q5DT21 86 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 UBE2UQ5VVX9 321 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 ZNF705AQ6ZN79 300 aaPredicted RBP2.17□□□□□ -2.06
SLIRP-202ENST00000553981 Q6ZRN7 208 aaPredicted RBP2.17□□□□□ -2.06
SLIRP-202ENST00000553981 NOTCH2NLQ7Z3S9 236 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 SPATA12Q7Z6I5 190 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 NOXA1Q86UR1 476 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 SLC25A42Q86VD7 318 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 SLC38A6Q8IZM9 456 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 ZNF709Q8N972 641 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 GDPD1Q8N9F7 314 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 UBAC2Q8NBM4 344 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 FCAMRQ8WWV6 532 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 DGCR14Q96DF8 476 aaKnown RBP2.17□□□□□ -2.06
SLIRP-202ENST00000553981 SLC25A38Q96DW6 304 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 RAB3CQ96E17 227 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 BSCL2Q96G97 398 aaPredicted RBP2.17□□□□□ -2.06
SLIRP-202ENST00000553981 ADTRPQ96IZ2 230 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 CXorf58Q96LI9 332 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 RAB40CQ96S21 281 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 URM1Q9BTM9 101 aaKnown RBP2.17□□□□□ -2.06
SLIRP-202ENST00000553981 NXF2Q9GZY0 626 aaKnown RBP2.17□□□□□ -2.06
SLIRP-202ENST00000553981 MFFQ9GZY8 342 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 FXYD6Q9H0Q3 95 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 DCSTAMPQ9H295 470 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 PLGRKTQ9HBL7 147 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 XCL2Q9UBD3 114 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 HSPB7Q9UBY9 170 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 RAB22AQ9UL26 194 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 RBM7Q9Y580 266 aaKnown RBP2.17□□□□□ -2.06
SLIRP-202ENST00000553981 V9GY05 133 aa2.17□□□□□ -2.06
SLIRP-202ENST00000553981 TRAV14DV4A0A0A6YYC5 116 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 IFITM5A6NNB3 132 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 PTGES3LE9PB15 166 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 F6UB75 175 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 H3BMM0 161 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 SOCS3O14543 225 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 MYL12BO14950 172 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 CRXO43186 299 aaPredicted RBP2.16□□□□□ -2.06
SLIRP-202ENST00000553981 DIRAS3O95661 229 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 TMEM50AO95807 157 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 MT-CO2P00403 227 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 PPYP01298 95 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 IGKV1-17P01599 117 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 SMR3BP02814 79 aaPredicted RBP2.16□□□□□ -2.06
SLIRP-202ENST00000553981 P0C879 139 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 TRAPPC2P0DI81 140 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 TRAPPC2BP0DI82 140 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 INAFM2P0DMQ5 153 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 P0DMU3 169 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 FAM231AP0DMU4 169 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 FAM231CP0DMU5 169 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 DEFA4P12838 97 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 MIFP14174 115 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 HIST1H1BP16401 226 aaKnown RBP2.16□□□□□ -2.06
SLIRP-202ENST00000553981 DTYMKP23919 212 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 FCGR2CP31995 323 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 LPAR6P43657 344 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 TAS2R31P59538 309 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 FXYD4P59646 89 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 KRTAP10-1P60331 282 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 SEC61BP60468 96 aaKnown RBP2.16□□□□□ -2.06
SLIRP-202ENST00000553981 MED22Q15528 200 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 USF2Q15853 346 aaPredicted RBP2.16□□□□□ -2.06
SLIRP-202ENST00000553981 Q56UQ5 140 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 ACTL10Q5JWF8 245 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 OGFRL1Q5TC84 451 aaPredicted RBP2.16□□□□□ -2.06
SLIRP-202ENST00000553981 C1orf134Q5TEV5 83 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 HACD4Q5VWC8 232 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 LAMTOR1Q6IAA8 161 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 CNIH2Q6PI25 160 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 LYPD1Q8N2G4 141 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 MS4A15Q8N5U1 240 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 OR13F1Q8NGS4 319 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 OR51H1Q8NH63 302 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 OR4S2Q8NH73 311 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 SLC25A46Q96AG3 418 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 SEC22AQ96IW7 307 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 GINS4Q9BRT9 223 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 YTHDF1Q9BYJ9 559 aaKnown RBP2.16□□□□□ -2.06
SLIRP-202ENST00000553981 SLC35B3Q9H1N7 401 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 DUSP21Q9H596 190 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 HRASLSQ9HDD0 168 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 ANXA10Q9UJ72 324 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 TBC1D24Q9ULP9 559 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 MGAT4AQ9UM21 535 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 LINC00588Q9Y4M8 146 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 ORC6Q9Y5N6 252 aa2.16□□□□□ -2.06
SLIRP-202ENST00000553981 PUS1Q9Y606 427 aaKnown RBP eCLIP2.16□□□□□ -2.06
SLIRP-202ENST00000553981 TNXBP22105 4242 aa2.15□□□□□ -2.06
SLIRP-202ENST00000553981 NBDYA0A0U1RRE5 68 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 IRGMA1A4Y4 181 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 ST8SIA3O43173 380 aa2.15□□□□□ -2.07
SLIRP-202ENST00000553981 RBFOX2O43251 390 aaKnown RBP eCLIP2.15□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms