RNA–Protein interactions for RNA: ENST00000553619.1

VTI1B-202, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-202ENST00000553619 P2RX4Q99571 388 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 TXN2Q99757 166 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 PARP11Q9NR21 331 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 KCNIP2Q9NS61 270 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 ZNF355PQ9NSJ1 428 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 UQCC1Q9NVA1 299 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 FAM30AQ9NZY2 134 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 FBXL17Q9UF56 701 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 FBXO7Q9Y3I1 522 aa3.94□□□□□ -1.78
VTI1B-202ENST00000553619 HRNRQ86YZ3 2850 aaPredicted RBP3.94□□□□□ -1.78
VTI1B-202ENST00000553619 ADGRG4Q8IZF6 3080 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 A0A0G2JLM5 398 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 MDFIC2A0A1B0GVS7 189 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 SMCO3A2RU48 225 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 CGB1A6NKQ9 187 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 PMS2P5A8MQ11 134 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 ATP6V0E1O15342 81 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 TCF21O43680 179 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 CFDP00746 253 aaPredicted RBP3.93□□□□□ -1.78
VTI1B-202ENST00000553619 MBP02144 154 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 S100A9P06702 114 aaKnown RBP3.93□□□□□ -1.78
VTI1B-202ENST00000553619 ELANEP08246 267 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 SEC11BP0C7V7 166 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 FAM157CP0CG43 387 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 MYOD1P15172 320 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 S100A7P31151 101 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 OPRK1P41145 380 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 RAB5CP51148 216 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 MFAP4P55083 255 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 SELENOTP62341 195 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 SERF2P84101 59 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 AKR1C1Q04828 323 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 CLINT1Q14677 625 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 ECSCRQ19T08 205 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 C10orf55Q5SWW7 151 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 RPL7L1Q6DKI1 246 aaKnown RBP3.93□□□□□ -1.78
VTI1B-202ENST00000553619 PVRIGQ6DKI7 326 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 TEX261Q6UWH6 196 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 IL17RELQ6ZVW7 336 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 COMMD1Q8N668 190 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 OR5T1Q8NG75 326 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 OR2T6Q8NHC8 308 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 STOML3Q8TAV4 291 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 VN1R17PQ8TDU5 208 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 USMG5Q96IX5 58 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 ATP6V0BQ99437 205 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 HSPB9Q9BQS6 159 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 GINS3Q9BRX5 216 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 PSMG3Q9BT73 122 aaPredicted RBP3.93□□□□□ -1.78
VTI1B-202ENST00000553619 FAM103A1Q9BTL3 118 aaKnown RBP3.93□□□□□ -1.78
VTI1B-202ENST00000553619 SMIM3Q9BZL3 60 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 TNFRSF19Q9NS68 423 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 UBQLN2Q9UHD9 624 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 TIMM9Q9Y5J7 89 aa3.93□□□□□ -1.78
VTI1B-202ENST00000553619 SOX21Q9Y651 276 aaPredicted RBP3.93□□□□□ -1.78
VTI1B-202ENST00000553619 NAV3Q8IVL0 2385 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 ABCA12Q86UK0 2595 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 TRBV7-1A0A0A6YYK4 115 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 A0A1B0GUS0 222 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 FAM223BA6NKX1 122 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 UMAD1C9J7I0 102 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 TEX46H3BTG2 121 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 CRLF1O75462 422 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 MT-CO2P00403 227 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 AMY1AP04745 511 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 REG1AP05451 166 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 AREGP15514 252 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 CAMLGP49069 296 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 HILS1P60008 231 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 RAB2AP61019 212 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 BLCAPP62952 87 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 ATP5G2Q06055 141 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 VWC2Q2TAL6 325 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 KLK9Q2XQG4 91 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 ACOT6Q3I5F7 207 aaPredicted RBP3.92□□□□□ -1.78
VTI1B-202ENST00000553619 AKR1C8PQ5T2L2 129 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 ACSM6Q6P461 480 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 TEX38Q6PEX7 206 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 BTNL8Q6UX41 500 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 DPPA3Q6W0C5 159 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 Q6ZRG5 221 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 CENPVQ7Z7K6 275 aaPredicted RBP3.92□□□□□ -1.78
VTI1B-202ENST00000553619 FAM223AQ8IWN6 122 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 LINC00518Q8N0U6 118 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 Q8N2B8 174 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 NECAP1Q8NC96 275 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 TMEM116Q8NCL8 245 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 ZNF680Q8NEM1 530 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 OR2G3Q8NGZ4 309 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 OR4X1Q8NH49 305 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 SCARB1Q8WTV0 552 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 TAF15Q92804 592 aaKnown RBP eCLIP3.92□□□□□ -1.78
VTI1B-202ENST00000553619 EEF1AKMT3Q96AZ1 226 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 RBMXL1Q96E39 390 aaKnown RBP3.92□□□□□ -1.78
VTI1B-202ENST00000553619 RNF2Q99496 336 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 SMR3AQ99954 134 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 C19orf24Q9BVV8 132 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 WDR61Q9GZS3 305 aaKnown RBP3.92□□□□□ -1.78
VTI1B-202ENST00000553619 ARV1Q9H2C2 271 aa3.92□□□□□ -1.78
VTI1B-202ENST00000553619 SLC25A32Q9H2D1 315 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms