RNA–Protein interactions for RNA: ENST00000553570.5

ATXN3-222, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-222ENST00000553570 E7EUB6 86 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 LINC01619G3V211 115 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 ZNF701M0R085 212 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-222ENST00000553570 OVOL1O14753 267 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 CYB5BO43169 146 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 GSTZ1O43708 216 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-222ENST00000553570 SOX15O60248 233 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 SAP30O75446 220 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 DFFBO76075 338 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 CD74P04233 296 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 CTSDP07339 412 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-222ENST00000553570 OR5AC1P0C628 307 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 OR8U8P0C7N1 319 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 ZNF735P0CB33 412 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 AREGP15514 252 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 TBPP20226 339 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 ETV6P41212 452 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 ZNF616Q08AN1 781 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 EIF4EBP1Q13541 118 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-222ENST00000553570 MSMO1Q15800 293 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 MRGPRG-AS1Q2M3A8 158 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 ZNF674Q2M3X9 581 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 KIAA1644Q3SXP7 199 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 CLEC19AQ6UXS0 136 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 C19orf35Q6ZS72 473 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 PUSL1Q8N0Z8 303 aaKnown RBP3.58□□□□□ -1.84
ATXN3-222ENST00000553570 TTC9CQ8N5M4 171 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 UBAC2Q8NBM4 344 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 OR1L8Q8NGR8 309 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 OR4A5Q8NH83 315 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 C4orf3Q8WVX3 66 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 MRGPRFQ96AM1 343 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 ZNF486Q96H40 463 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-222ENST00000553570 TMEM56Q96MV1 263 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 UHRF2Q96PU4 802 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 OR4C12Q96R67 309 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 TP53RKQ96S44 253 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 P2RX4Q99571 388 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 TSC22D3Q99576 134 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 RTBDNQ9BSG5 229 aaPredicted RBP3.58□□□□□ -1.84
ATXN3-222ENST00000553570 MCRIP2Q9BUT9 160 aaKnown RBP3.58□□□□□ -1.84
ATXN3-222ENST00000553570 FKBP11Q9NYL4 201 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 BET1LQ9NYM9 111 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 PEF1Q9UBV8 284 aaKnown RBP3.58□□□□□ -1.84
ATXN3-222ENST00000553570 SELENOKQ9Y6D0 94 aa3.58□□□□□ -1.84
ATXN3-222ENST00000553570 IGHV3-35A0A0C4DH35 117 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 PMS2P5A8MQ11 134 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 CEBPZOSA8MTT3 80 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 PPP5D1E7EU14 171 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 I3L521 148 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 RBFOX2O43251 390 aaKnown RBP eCLIP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 IGHV3-48P01763 117 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 HLA-AP01891 365 aaKnown RBP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 LGALS1P09382 135 aaKnown RBP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 ANXA3P12429 323 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 HIST1H1BP16401 226 aaKnown RBP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 PTBP1P26599 531 aaKnown RBP eCLIP3.57□□□□□ -1.844e-18■■■■■ 40.6
ATXN3-222ENST00000553570 PSMB6P28072 239 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 SLC6A1P30531 599 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 SNCAP37840 140 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 CCR6P51684 374 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 SYNJ2BPP57105 145 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 ERHP84090 104 aaKnown RBP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 DHODHQ02127 395 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 EXOSC2Q13868 293 aaKnown RBP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 KIAA0141Q14154 515 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 RPEL1Q2QD12 228 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 C15orf32Q32M92 178 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 CNPY1Q3B7I2 92 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 PDLIM3Q53GG5 364 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 C9orf66Q5T8R8 295 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 SELENOHQ8IZQ5 122 aaKnown RBP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 SLC35G3Q8N808 338 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 GDPD1Q8N9F7 314 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 MRAPQ8TCY5 172 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 DLX4Q92988 240 aaPredicted RBP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 EEF1AKMT3Q96AZ1 226 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 PINX1Q96BK5 328 aaKnown RBP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 USMG5Q96IX5 58 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 SOSTQ9BQB4 213 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 NAA60Q9H7X0 242 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 COMMD9Q9P000 198 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 THYN1Q9P016 225 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 PRNDQ9UKY0 176 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 PAIP2BQ9ULR5 123 aaKnown RBP3.57□□□□□ -1.84
ATXN3-222ENST00000553570 GPR132Q9UNW8 380 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 ZNF257Q9Y2Q1 563 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 V9GYH0 126 aa3.57□□□□□ -1.84
ATXN3-222ENST00000553570 VWFP04275 2813 aa3.56□□□□□ -1.84
ATXN3-222ENST00000553570 FAM223BA6NKX1 122 aa3.56□□□□□ -1.84
ATXN3-222ENST00000553570 H0Y980 276 aa3.56□□□□□ -1.84
ATXN3-222ENST00000553570 H3BUA1 57 aa3.56□□□□□ -1.84
ATXN3-222ENST00000553570 DUS4LO95620 317 aaKnown RBP3.56□□□□□ -1.84
ATXN3-222ENST00000553570 IGKV1-39P01597 117 aa3.56□□□□□ -1.84
ATXN3-222ENST00000553570 TRBV12-3P01733 135 aa3.56□□□□□ -1.84
ATXN3-222ENST00000553570 IGKV1D-39P04432 117 aa3.56□□□□□ -1.84
ATXN3-222ENST00000553570 ZP3P21754 424 aa3.56□□□□□ -1.84
ATXN3-222ENST00000553570 CRIP2P52943 208 aaPredicted RBP3.56□□□□□ -1.84
ATXN3-222ENST00000553570 SUB1P53999 127 aaKnown RBP eCLIP3.56□□□□□ -1.84
ATXN3-222ENST00000553570 RND3P61587 244 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms