RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 SPTA1P02549 2419 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 SPTBN2O15020 2390 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 RP1L1Q8IWN7 2480 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-221ENST00000553498 IGKV1D-37A0A075B6S9 117 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 IGHV1-69DA0A0B4J2H0 117 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 NCBP2LA6PVI3 153 aaKnown RBP5.79□□□□□ -1.48
ATXN3-221ENST00000553498 B4DSR2 109 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 C9JCJ5 164 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 J3QLI3 93 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 FCN1O00602 326 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 HYPMO75409 117 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 IGHV1-69P01742 117 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 SAA4P35542 130 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 DLX1P56177 255 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 RAB5BP61020 215 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 CX3CL1P78423 397 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 SSBP2P81877 361 aaPredicted RBP5.79□□□□□ -1.48
ATXN3-221ENST00000553498 C21orf62-AS1Q17RA5 79 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 MIR17HGQ75NE6 70 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 LRRC75A-AS1Q8N1F1 130 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 TMEM37Q8WXS4 190 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 HIST1H2BAQ96A08 127 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 IMMP2LQ96T52 175 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 RASL11BQ9BPW5 248 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 C20orf24Q9BUV8 137 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 MEGF9Q9H1U4 602 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 GAR1Q9NY12 217 aaKnown RBP5.79□□□□□ -1.48
ATXN3-221ENST00000553498 SVILO95425 2214 aa5.79□□□□□ -1.48
ATXN3-221ENST00000553498 CADP27708 2225 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 IGLV11-55A0A075B6I3 123 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 TRBV24-1A0A075B6N3 115 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 IGHV4-61A0A0C4DH41 118 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 CENPVL3A0A0U1RRI6 287 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 A0A1W2PRD5 423 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 A0A1W2PRF3 423 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 A0A1W2PRM7 423 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 C1orf196B1AJZ1 125 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 NPIPB6E9PJ23 425 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 M0QZK8 103 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 OR7C2O60412 319 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 S100A9P06702 114 aaKnown RBP5.78□□□□□ -1.48
ATXN3-221ENST00000553498 MSMBP08118 114 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 IGLC1P0CG04 106 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 RAB5AP20339 215 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 S100PP25815 95 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 MFAP2P55001 183 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 YPEL3P61236 119 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-221ENST00000553498 SUMO1P63165 101 aaKnown RBP5.78□□□□□ -1.48
ATXN3-221ENST00000553498 Q8N9W7 124 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 OR51G1Q8NGK1 321 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 VN1R17PQ8TDU5 208 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 SMIM12Q96EX1 92 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 AJUBAQ96IF1 538 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 CCDC140Q96MF4 163 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 YPEL4Q96NS1 127 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 CLUHP3Q96NS8 147 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 BBC3Q96PG8 261 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-221ENST00000553498 OR5B12Q96R08 314 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 BEX4Q9NWD9 120 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-221ENST00000553498 TMEM14CQ9P0S9 112 aa5.78□□□□□ -1.48
ATXN3-221ENST00000553498 LOC105371267A0A1B0GV96 52 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 K7EIM0 57 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 NDUFB4O95168 129 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 BRI3O95415 125 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 TOMM40O96008 361 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 REG1AP05451 166 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 CRYBA1P05813 215 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 RD3LP0DJH9 198 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 SRP14P37108 136 aaKnown RBP5.77□□□□□ -1.49
ATXN3-221ENST00000553498 CRIP2P52943 208 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-221ENST00000553498 MFAP4P55083 255 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 LINC00310P59036 64 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 TAS2R60P59551 318 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 RPL23P62829 140 aaKnown RBP5.77□□□□□ -1.49
ATXN3-221ENST00000553498 UBE2L3P68036 154 aaKnown RBP5.77□□□□□ -1.49
ATXN3-221ENST00000553498 ZNF90Q03938 601 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 ADIRFQ15847 76 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 ZNF674Q2M3X9 581 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 AKIRIN2Q53H80 203 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 SPATA31B1PQ5VZV4 182 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 KCNIP4Q6PIL6 250 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 LCNL1Q6ZST4 164 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 C16orf82Q7Z2V1 217 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 LINC00305Q7Z4B0 112 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 DYNAPQ8N1N2 210 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 FAM24BQ8N5W8 94 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 SGMS2Q8NHU3 365 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 FAM110DQ8TAY7 271 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-221ENST00000553498 FAM167A-AS1Q96KT0 104 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 PAXXQ9BUH6 204 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 OR51M1Q9H341 326 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 ZNF355PQ9NSJ1 428 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 PITPNC1Q9UKF7 332 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 HIGD1AQ9Y241 93 aa5.77□□□□□ -1.49
ATXN3-221ENST00000553498 RAI1Q7Z5J4 1906 aaPredicted RBP5.77□□□□□ -1.49
ATXN3-221ENST00000553498 HEATR1Q9H583 2144 aaKnown RBP5.77□□□□□ -1.49
ATXN3-221ENST00000553498 DSCAMO60469 2012 aa5.76□□□□□ -1.49
ATXN3-221ENST00000553498 TRAV9-1A0A075B6T8 112 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms