RNA–Protein interactions for RNA: ENST00000552341.5

PFDN5-216, Transcript of prefoldin subunit 5, humanhuman

TSL 2

Gene PFDN5, Length 1,980 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-216ENST00000552341 SLC25A16P16260 332 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 GATA2P23769 480 aaPredicted RBP8.6□□□□□ -1.03
PFDN5-216ENST00000552341 OR10J1P30954 320 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 NDPQ00604 133 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 FXYD3Q14802 87 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 ZNF562Q6V9R5 426 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 HIST3H2BBQ8N257 126 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 CYB561D1Q8N8Q1 229 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 THAP8Q8NA92 274 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 ABHD5Q8WTS1 349 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 ACY3Q96HD9 319 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 SLC35E1Q96K37 410 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 ZANQ9Y493 2812 aa8.6□□□□□ -1.03
PFDN5-216ENST00000552341 IGHV1-69DA0A0B4J2H0 117 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 PPP1R2P9O14990 202 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 IGHV1-69P01742 117 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 TMEM11P17152 192 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 CX3CL1P78423 397 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 ELOBQ15370 118 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 ASPHD1Q5U4P2 390 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 SLC35E3Q7Z769 313 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 Q8N9W7 124 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 TMEM116Q8NCL8 245 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 OR10D4PQ8NGN7 298 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 GATAD1Q8WUU5 269 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 NPIPB3Q92617 1050 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 NEU1Q99519 415 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 ABCA12Q86UK0 2595 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 HIST1H2BKO60814 126 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 CNIH1O95406 144 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 HIST1H2BJP06899 126 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 FAM106CPP0CH98 169 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 RD3LP0DJH9 198 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 PLA2G2AP14555 144 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 HIST1H2BOP23527 126 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 HIST1H2BBP33778 126 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 HIST1H2BDP58876 126 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 HIST1H2BCP62807 126 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 HIST2H2BEQ16778 126 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.59□□□□□ -1.03
PFDN5-216ENST00000552341 SPATA31B1PQ5VZV4 182 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 HIST1H2BHQ93079 126 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 HIST1H2BNQ99877 126 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 HIST1H2BMQ99879 126 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 SLC25A33Q9BSK2 321 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 FAM103A1Q9BTL3 118 aaKnown RBP8.59□□□□□ -1.03
PFDN5-216ENST00000552341 VAX2Q9UIW0 290 aa8.59□□□□□ -1.03
PFDN5-216ENST00000552341 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.58□□□□□ -1.042e-7■■■■□ 20.5
PFDN5-216ENST00000552341 TRAV40A0A0B4J280 105 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 A0A1W2PPV4 95 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 NCBP2LA6PVI3 153 aaKnown RBP8.58□□□□□ -1.04
PFDN5-216ENST00000552341 B4DEV8 164 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 B4DSR2 109 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 I3L2K1 104 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 CORTO00230 105 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 AVPP01185 164 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 IGHV4-38-2P0DP08 117 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 BRS3P32247 399 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 RND2P52198 227 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 FAM90A2PQ658T7 463 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 CYP2G1PQ6ZSU1 146 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 PIFOQ8TCI5 191 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 MISP3Q96FF7 219 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 NOL4LQ96MY1 436 aaPredicted RBP8.58□□□□□ -1.04
PFDN5-216ENST00000552341 SSX3Q99909 188 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 WNT10AQ9GZT5 417 aa8.58□□□□□ -1.04
PFDN5-216ENST00000552341 IGHV3OR16-10A0A075B7F0 116 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 TCRBV4S1A1TA0A5B7 111 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 MT-CO2P00403 227 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 EGR2P11161 476 aaPredicted RBP8.57□□□□□ -1.04
PFDN5-216ENST00000552341 MEF2BQ02080 365 aaPredicted RBP8.57□□□□□ -1.04
PFDN5-216ENST00000552341 ZNF90Q03938 601 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 RELQ04864 619 aaPredicted RBP8.57□□□□□ -1.04
PFDN5-216ENST00000552341 ZNF674Q2M3X9 581 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 ETFRF1Q6IPR1 90 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 BRD3OSQ6XYD6 125 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 TMEM37Q8WXS4 190 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 TMEM242Q9NWH2 141 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 HIF1ANQ9NWT6 349 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 ABCA1O95477 2261 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 IGHV7-81A0A0B4J1V7 117 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 H3BQ15 152 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 IFNA1P01562 189 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 HLA-DRB1P01911 266 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 OR5G3P0C626 314 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 ARL14EPLP0DKL9 152 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 TAGLN2P37802 199 aaKnown RBP8.57□□□□□ -1.04
PFDN5-216ENST00000552341 PSMB3P49720 205 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 RHOBP62745 196 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 CDPF1Q6NVV7 123 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 SPNS3Q6ZMD2 512 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 Q8WTZ3 238 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 ARPC1AQ92747 370 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 TMEM68Q96MH6 324 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 C19orf24Q9BVV8 132 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 MEGF9Q9H1U4 602 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 C7orf69Q9H7B7 122 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 MANBALQ9NQG1 85 aa8.57□□□□□ -1.04
PFDN5-216ENST00000552341 PUS1Q9Y606 427 aaKnown RBP eCLIP8.57□□□□□ -1.04
PFDN5-216ENST00000552341 IGHV3-21A0A0B4J1V1 117 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms