RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 DEFB130AP0DP74 79 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 HLA-GP17693 338 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 CALRP27797 417 aaKnown RBP1.44□□□□□ -2.18
PTCH1-223ENST00000551623 ETV6P41212 452 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 P2RY1P47900 373 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 EIF2B2P49770 351 aaKnown RBP1.44□□□□□ -2.18
PTCH1-223ENST00000551623 MNAT1P51948 309 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 GBX2P52951 348 aaPredicted RBP1.44□□□□□ -2.18
PTCH1-223ENST00000551623 AP2S1P53680 142 aaPredicted RBP1.44□□□□□ -2.18
PTCH1-223ENST00000551623 MRPS15P82914 257 aaKnown RBP1.44□□□□□ -2.18
PTCH1-223ENST00000551623 CD300CQ08708 224 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 PLA2G7Q13093 441 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 CIRBPQ14011 172 aaKnown RBP1.44□□□□□ -2.18
PTCH1-223ENST00000551623 LAGE3Q14657 143 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 MSMO1Q15800 293 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 TIMM50Q3ZCQ8 353 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 TP53I3Q53FA7 332 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 ACSM3Q53FZ2 586 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 PSMG4Q5JS54 123 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 DDI2Q5TDH0 399 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 TMEM236Q5W0B7 351 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 FAAP20Q6NZ36 180 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 TOMM20LQ6UXN7 152 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 ZNF600Q6ZNG1 722 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 FOXI2Q6ZQN5 318 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 Q6ZS49 121 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 FAM89BQ8N5H3 189 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 ZFP41Q8N8Y5 198 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 STXBP6Q8NFX7 210 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 OR10H4Q8NGA5 316 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 OR4A4PQ8NGN8 299 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 OR1P1Q8NH06 330 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 OR4S2Q8NH73 311 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 THAP6Q8TBB0 222 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 RNASE8Q8TDE3 154 aaKnown RBP1.44□□□□□ -2.18
PTCH1-223ENST00000551623 FCGR1BQ92637 280 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 GGHQ92820 318 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 PPP1R14BQ96C90 147 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 NSMCE2Q96MF7 247 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 IL4I1Q96RQ9 567 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 ZNF184Q99676 751 aaPredicted RBP1.44□□□□□ -2.18
PTCH1-223ENST00000551623 CENPOQ9BU64 300 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 FAM192AQ9GZU8 254 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 OR2D2Q9H210 308 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 SAV1Q9H4B6 383 aaPredicted RBP1.44□□□□□ -2.18
PTCH1-223ENST00000551623 EFCAB1Q9HAE3 211 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 SCPEP1Q9HB40 452 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 NRN1Q9NPD7 142 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 NDUFA4L2Q9NRX3 87 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 RABAC1Q9UI14 185 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 GNG8Q9UK08 70 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 EXOGQ9Y2C4 368 aaKnown RBP1.44□□□□□ -2.18
PTCH1-223ENST00000551623 MRPS7Q9Y2R9 242 aaKnown RBP1.44□□□□□ -2.18
PTCH1-223ENST00000551623 PRELID3BQ9Y3B1 194 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 LY96Q9Y6Y9 160 aa1.44□□□□□ -2.18
PTCH1-223ENST00000551623 IGHV3OR16-13A0A075B7E8 117 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 IGHV3-49A0A0A0MS15 119 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 IGHV3-74A0A0B4J1X5 117 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TRBV5-5A0A0J9YX44 114 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 A0A0J9YX75 114 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TEX13DA0A0J9YY54 714 aaPredicted RBP1.43□□□□□ -2.18
PTCH1-223ENST00000551623 IBA57-AS1B1ANH7 110 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TRDCB7Z8K6 153 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 INS-IGF2F8WCM5 200 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 ADAP1O75689 374 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 DCTN3O75935 186 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 YIF1AO95070 293 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 BAG2O95816 211 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 HRASP01112 189 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 CDK1P06493 297 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 EIF4EP06730 217 aaKnown RBP1.43□□□□□ -2.18
PTCH1-223ENST00000551623 KRTAP1-4P0C5Y4 121 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 UBBP0CG47 229 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 COX4I1P13073 169 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 EVI2AP22794 236 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 NPPCP23582 126 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 PSMB3P49720 205 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 RORCP51449 518 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 MFAP4P55083 255 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TAS2R43P59537 309 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TAS2R60P59551 318 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 MAGOHP61326 146 aaKnown RBP1.43□□□□□ -2.18
PTCH1-223ENST00000551623 VSNL1P62760 191 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 QRFPP83859 136 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 PSG9Q00887 426 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 ZNF415Q09FC8 603 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 PPP1R8Q12972 351 aaKnown RBP1.43□□□□□ -2.18
PTCH1-223ENST00000551623 WFDC2Q14508 124 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 RCN1Q15293 331 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 CCDC58Q4VC31 144 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 IGSF11Q5DX21 431 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 OR2G6Q5TZ20 316 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 GDF5OSQ5U4N7 250 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 C16orf54Q6UWD8 224 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 GLIPR1L1Q6UWM5 242 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 KCTD9Q7L273 389 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 C6orf201Q7Z4U5 140 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 TMED4Q7Z7H5 227 aa1.43□□□□□ -2.18
PTCH1-223ENST00000551623 H1FOOQ8IZA3 346 aaPredicted RBP1.43□□□□□ -2.18
PTCH1-223ENST00000551623 VKORC1L1Q8N0U8 176 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms