RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 MOB3AQ96BX8 217 aa8.36□□□□□ -1.07
PTCH1-222ENST00000551425 FKBP11Q9NYL4 201 aa8.36□□□□□ -1.07
PTCH1-222ENST00000551425 SNAPC5O75971 98 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 CCL18P55774 89 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 DAD1P61803 113 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 DHRS2Q13268 280 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 IL18Q14116 193 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 GSG1LQ6UXU4 331 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 OR51H1Q8NH63 302 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 METTL26Q96S19 204 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 SCPEP1Q9HB40 452 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 SEPSECSQ9HD40 501 aaKnown RBP8.35□□□□□ -1.07
PTCH1-222ENST00000551425 PRNDQ9UKY0 176 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 NSG2Q9Y328 171 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 LINC00588Q9Y4M8 146 aa8.35□□□□□ -1.07
PTCH1-222ENST00000551425 YTHDF2Q9Y5A9 579 aaKnown RBP8.35□□□□□ -1.07
PTCH1-222ENST00000551425 IGHV3OR16-12A0A075B7B8 117 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 TMEM50AO95807 157 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 PPYP01298 95 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 PTHLHP12272 177 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 HLA-DRB4P13762 266 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 FCGR2CP31995 323 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 EIF2B2P49770 351 aaKnown RBP8.34□□□□□ -1.07
PTCH1-222ENST00000551425 ARPC4P59998 168 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 MRPS10P82664 201 aaKnown RBP8.34□□□□□ -1.07
PTCH1-222ENST00000551425 TTC32Q5I0X7 151 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 SPANXN2Q5MJ10 180 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 CCDC190Q86UF4 302 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 SNX29P2Q8IUI4 249 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 NUDCD2Q8WVJ2 157 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 PINX1Q96BK5 328 aaKnown RBP8.34□□□□□ -1.07
PTCH1-222ENST00000551425 SOSTQ9BQB4 213 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 KRTAP1-5Q9BYS1 174 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 SLC5A7Q9GZV3 580 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 PGPEP1Q9NXJ5 209 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 HLA-DRB4X5D2U9 266 aa8.34□□□□□ -1.07
PTCH1-222ENST00000551425 HMCN2Q8NDA2 5059 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 DBX1A6NMT0 343 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 GABARAPH6UMI1 98 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 CTDSPLO15194 276 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 SSX5O60225 188 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 ETV6P41212 452 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 HOXA1P49639 335 aaPredicted RBP8.33□□□□□ -1.08
PTCH1-222ENST00000551425 SNRPD3P62318 126 aaKnown RBP8.33□□□□□ -1.08
PTCH1-222ENST00000551425 AADACL3Q5VUY0 350 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 ZNF818PQ6ZRF7 136 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 GPX8Q8TED1 209 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 FCAMRQ8WWV6 532 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 NARS2Q96I59 477 aaKnown RBP8.33□□□□□ -1.08
PTCH1-222ENST00000551425 ABHD1Q96SE0 405 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 Q9H8V8 135 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 IFT46Q9NQC8 304 aa8.33□□□□□ -1.08
PTCH1-222ENST00000551425 LOC102723971A0A1B0GUV8 181 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 RPS10-NUDT3A0A1W2PQS6 291 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 MEIS3P1A6NDR6 274 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 FAM90A26D6RGX4 464 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 NUDT3O95989 172 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 KRASP01116 189 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 HBE1P02100 147 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 F2RP25116 425 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 PPP5CP53041 499 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 AP2S1P53680 142 aaPredicted RBP8.32□□□□□ -1.08
PTCH1-222ENST00000551425 PYDC2Q56P42 97 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 HOGA1Q86XE5 327 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 S100ZQ8WXG8 99 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 Q9H3A6 140 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 MDFICQ9P1T7 246 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 U3KQE9 123 aa8.32□□□□□ -1.08
PTCH1-222ENST00000551425 NAT1P18440 290 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 RCVRNP35243 200 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 G6PCP35575 357 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 SSBP1Q04837 148 aaKnown RBP8.31□□□□□ -1.08
PTCH1-222ENST00000551425 SERTAD4-AS1Q5TG53 156 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 CDPF1Q6NVV7 123 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 BEST4Q8NFU0 473 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 OR52I2Q8NH67 350 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 SMIM4Q8WVI0 70 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 GLMPQ8WWB7 406 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 C17orf77Q96MU5 243 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 CLUHP3Q96NS8 147 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 TSC22D3Q99576 134 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 MTFP1Q9UDX5 166 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 ANAPC10Q9UM13 185 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 V9GYH0 126 aa8.31□□□□□ -1.08
PTCH1-222ENST00000551425 A0A1W2PPQ1 181 aa8.3□□□□□ -1.08
PTCH1-222ENST00000551425 FAM229AH3BQW9 127 aa8.3□□□□□ -1.08
PTCH1-222ENST00000551425 GSTZ1O43708 216 aaPredicted RBP8.3□□□□□ -1.08
PTCH1-222ENST00000551425 LPAR6P43657 344 aa8.3□□□□□ -1.08
PTCH1-222ENST00000551425 NKX2-1P43699 371 aaPredicted RBP8.3□□□□□ -1.08
PTCH1-222ENST00000551425 FXYD7P58549 80 aa8.3□□□□□ -1.08
PTCH1-222ENST00000551425 PRCDQ00LT1 54 aa8.3□□□□□ -1.08
PTCH1-222ENST00000551425 USF2Q15853 346 aaPredicted RBP8.3□□□□□ -1.08
PTCH1-222ENST00000551425 RNASE12Q5GAN4 147 aaKnown RBP8.3□□□□□ -1.08
PTCH1-222ENST00000551425 C16orf54Q6UWD8 224 aa8.3□□□□□ -1.08
PTCH1-222ENST00000551425 SSX7Q7RTT5 188 aa8.3□□□□□ -1.08
PTCH1-222ENST00000551425 C1orf158Q8N1D5 194 aa8.3□□□□□ -1.08
PTCH1-222ENST00000551425 ZNF709Q8N972 641 aa8.3□□□□□ -1.08
PTCH1-222ENST00000551425 BORCS5Q969J3 196 aa8.3□□□□□ -1.08
PTCH1-222ENST00000551425 KLK11Q9UBX7 282 aa8.3□□□□□ -1.08
PTCH1-222ENST00000551425 GOLT1BQ9Y3E0 138 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms