RNA–Protein interactions for RNA: ENST00000550419.5

CDK4-207, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 919 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-207ENST00000550419 GINS3Q9BRX5 216 aa13.21□□□□□ -0.29
CDK4-207ENST00000550419 RCL1Q9Y2P8 373 aaKnown RBP13.21□□□□□ -0.29
CDK4-207ENST00000550419 LSM4Q9Y4Z0 139 aaKnown RBP13.21□□□□□ -0.29
CDK4-207ENST00000550419 SORL1Q92673 2214 aa13.21□□□□□ -0.29
CDK4-207ENST00000550419 FAM25EA8MYX2 175 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 TSC22D2O75157 780 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 YIF1AO95070 293 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 EDN2P20800 178 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 OR10J1P30954 320 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 GAMTQ14353 236 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 SPANXN5Q5MJ07 72 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 NPIPB3Q92617 1050 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 C20orf24Q9BUV8 137 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 ZFAND3Q9H8U3 227 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 PSENENQ9NZ42 101 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 MLXQ9UH92 298 aa13.2□□□□□ -0.3
CDK4-207ENST00000550419 PUS1Q9Y606 427 aaKnown RBP eCLIP13.2□□□□□ -0.3
CDK4-207ENST00000550419 TRAV25A0A0B4J276 109 aa13.19□□□□□ -0.3
CDK4-207ENST00000550419 C7orf66A4D0T2 115 aa13.19□□□□□ -0.3
CDK4-207ENST00000550419 SCGB1D2O95969 90 aa13.19□□□□□ -0.3
CDK4-207ENST00000550419 ACY3Q96HD9 319 aa13.19□□□□□ -0.3
CDK4-207ENST00000550419 SLC35E1Q96K37 410 aa13.19□□□□□ -0.3
CDK4-207ENST00000550419 SMPXQ9UHP9 88 aa13.19□□□□□ -0.3
CDK4-207ENST00000550419 TRAV14DV4A0A0A6YYC5 116 aa13.18□□□□□ -0.3
CDK4-207ENST00000550419 IGHV7-4-1A0A0J9YVY3 117 aa13.18□□□□□ -0.3
CDK4-207ENST00000550419 IZUMO1RA6ND01 250 aa13.18□□□□□ -0.3
CDK4-207ENST00000550419 H3BP45 60 aa13.18□□□□□ -0.3
CDK4-207ENST00000550419 TIGITQ495A1 244 aa13.18□□□□□ -0.3
CDK4-207ENST00000550419 TMEM14EPQ6UXP3 125 aa13.18□□□□□ -0.3
CDK4-207ENST00000550419 ZNF785A8K8V0 405 aa13.17□□□□□ -0.3
CDK4-207ENST00000550419 PMS2P5A8MQ11 134 aa13.17□□□□□ -0.3
CDK4-207ENST00000550419 SCAF4O95104 1147 aaKnown RBP13.17□□□□□ -0.3
CDK4-207ENST00000550419 CYCSP99999 105 aaKnown RBP13.17□□□□□ -0.3
CDK4-207ENST00000550419 BTNL8Q6UX41 500 aa13.17□□□□□ -0.3
CDK4-207ENST00000550419 TMEM61Q8N0U2 210 aa13.17□□□□□ -0.3
CDK4-207ENST00000550419 Q8WTZ3 238 aa13.17□□□□□ -0.3
CDK4-207ENST00000550419 PAIP2BQ9ULR5 123 aaKnown RBP13.17□□□□□ -0.3
CDK4-207ENST00000550419 IGHV3OR16-8A0A075B7F1 116 aa13.16□□□□□ -0.3
CDK4-207ENST00000550419 FNDC10F2Z333 226 aa13.16□□□□□ -0.3
CDK4-207ENST00000550419 K7EPK0 472 aa13.16□□□□□ -0.3
CDK4-207ENST00000550419 TOMM40O96008 361 aa13.16□□□□□ -0.3
CDK4-207ENST00000550419 CD5P06127 495 aa13.16□□□□□ -0.3
CDK4-207ENST00000550419 BMI1P35226 326 aa13.16□□□□□ -0.3
CDK4-207ENST00000550419 Q8N1Y9 231 aa13.16□□□□□ -0.3
CDK4-207ENST00000550419 THAP8Q8NA92 274 aa13.16□□□□□ -0.3
CDK4-207ENST00000550419 RHPN1-AS1Q9BWJ2 59 aa13.16□□□□□ -0.3
CDK4-207ENST00000550419 NMES1Q9C002 83 aa13.16□□□□□ -0.3
CDK4-207ENST00000550419 C11orf1Q9H5F2 150 aa13.16□□□□□ -0.3
CDK4-207ENST00000550419 L7N2F9 121 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 GOSR2O14653 212 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 CHEK1O14757 476 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 ZNF207O43670 478 aaKnown RBP13.15□□□□□ -0.3
CDK4-207ENST00000550419 FABP1P07148 127 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 RD3LP0DJH9 198 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 PVALBP20472 110 aaPredicted RBP13.15□□□□□ -0.3
CDK4-207ENST00000550419 CRYBB3P26998 211 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 VAMP2P63027 116 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 DEFB121Q5J5C9 76 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 LAMTOR1Q6IAA8 161 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 GTSCR1Q86UQ5 136 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 TRGV9Q99603 122 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 VSIRQ9H7M9 311 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 SMAD5-AS1Q9Y6J3 95 aa13.15□□□□□ -0.3
CDK4-207ENST00000550419 PRKDCP78527 4128 aaKnown RBP13.15□□□□□ -0.31
CDK4-207ENST00000550419 IGKV1D-37A0A075B6S9 117 aa13.14□□□□□ -0.31
CDK4-207ENST00000550419 ZFP92A6NM28 416 aa13.14□□□□□ -0.31
CDK4-207ENST00000550419 TSPAN4O14817 238 aa13.14□□□□□ -0.31
CDK4-207ENST00000550419 SSNA1O43805 119 aa13.14□□□□□ -0.31
CDK4-207ENST00000550419 NPPCP23582 126 aa13.14□□□□□ -0.31
CDK4-207ENST00000550419 DLK1P80370 383 aa13.14□□□□□ -0.31
CDK4-207ENST00000550419 RBPMS2Q6ZRY4 209 aaKnown RBP13.14□□□□□ -0.31
CDK4-207ENST00000550419 OR10P1Q8NGE3 313 aa13.14□□□□□ -0.31
CDK4-207ENST00000550419 WDR89Q96FK6 387 aaPredicted RBP13.14□□□□□ -0.31
CDK4-207ENST00000550419 METTL26Q96S19 204 aa13.14□□□□□ -0.31
CDK4-207ENST00000550419 SPAG8Q99932 426 aaPredicted RBP13.14□□□□□ -0.31
CDK4-207ENST00000550419 GGACTQ9BVM4 153 aa13.14□□□□□ -0.31
CDK4-207ENST00000550419 LSM5Q9Y4Y9 91 aaKnown RBP13.14□□□□□ -0.31
CDK4-207ENST00000550419 IGKV1OR2-108A0A075B7D4 117 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 A0A1W2PS18 150 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 A8MZ25 164 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 METTL15P1P0C7V9 234 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 PSG1P11464 419 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 H2BFSP57053 126 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 RAB32Q13637 225 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 RGS21Q2M5E4 152 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 OR8G2PQ6IF36 304 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 ACOT7LQ6ZUV0 252 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 TMEM144Q7Z5S9 345 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 OR51G1Q8NGK1 321 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 TMEM231Q9H6L2 316 aa13.13□□□□□ -0.31
CDK4-207ENST00000550419 SIX6O95475 246 aa13.12□□□□□ -0.31
CDK4-207ENST00000550419 CFDP00746 253 aaPredicted RBP13.12□□□□□ -0.31
CDK4-207ENST00000550419 GUCA2BQ16661 112 aa13.12□□□□□ -0.31
CDK4-207ENST00000550419 FAM90A2PQ658T7 463 aa13.12□□□□□ -0.31
CDK4-207ENST00000550419 RNF2Q99496 336 aa13.12□□□□□ -0.31
CDK4-207ENST00000550419 LYRM2Q9NU23 88 aaPredicted RBP13.12□□□□□ -0.31
CDK4-207ENST00000550419 ALG5Q9Y673 324 aa13.12□□□□□ -0.31
CDK4-207ENST00000550419 U3KQE9 123 aa13.12□□□□□ -0.31
CDK4-207ENST00000550419 DEDDO75618 318 aa13.11□□□□□ -0.31
CDK4-207ENST00000550419 IL4P05112 153 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms