RNA–Protein interactions for RNA: ENST00000549347.1

RAPGEF3-220, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 4

Gene RAPGEF3, Length 573 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-220ENST00000549347 ACY3Q96HD9 319 aa13.39□□□□□ -0.27
RAPGEF3-220ENST00000549347 SLC35E1Q96K37 410 aa13.39□□□□□ -0.27
RAPGEF3-220ENST00000549347 C20orf24Q9BUV8 137 aa13.39□□□□□ -0.27
RAPGEF3-220ENST00000549347 ZFAND3Q9H8U3 227 aa13.39□□□□□ -0.27
RAPGEF3-220ENST00000549347 TECRQ9NZ01 308 aaKnown RBP13.39□□□□□ -0.27
RAPGEF3-220ENST00000549347 MRPL27Q9P0M9 148 aaKnown RBP13.39□□□□□ -0.27
RAPGEF3-220ENST00000549347 PAIP2BQ9ULR5 123 aaKnown RBP13.39□□□□□ -0.27
RAPGEF3-220ENST00000549347 WI2-2373I1.2A0A1W2PRP0 233 aa13.38□□□□□ -0.27
RAPGEF3-220ENST00000549347 OR10J1P30954 320 aa13.38□□□□□ -0.27
RAPGEF3-220ENST00000549347 GAMTQ14353 236 aa13.38□□□□□ -0.27
RAPGEF3-220ENST00000549347 RGS21Q2M5E4 152 aa13.38□□□□□ -0.27
RAPGEF3-220ENST00000549347 DEFB114Q30KQ6 69 aa13.38□□□□□ -0.27
RAPGEF3-220ENST00000549347 LCN12Q6JVE5 192 aa13.38□□□□□ -0.27
RAPGEF3-220ENST00000549347 TOMM20LQ6UXN7 152 aa13.38□□□□□ -0.27
RAPGEF3-220ENST00000549347 TMEM14EPQ6UXP3 125 aa13.38□□□□□ -0.27
RAPGEF3-220ENST00000549347 C11orf1Q9H5F2 150 aa13.38□□□□□ -0.27
RAPGEF3-220ENST00000549347 LSM5Q9Y4Y9 91 aaKnown RBP13.38□□□□□ -0.27
RAPGEF3-220ENST00000549347 PUS1Q9Y606 427 aaKnown RBP eCLIP13.38□□□□□ -0.27
RAPGEF3-220ENST00000549347 IGHV3OR16-8A0A075B7F1 116 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 PMS2P5A8MQ11 134 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 K7EIL1 84 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 SSNA1O43805 119 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 YIF1AO95070 293 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 GP9P14770 177 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 YPEL3P61236 119 aaPredicted RBP13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 TIGITQ495A1 244 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 PRR25Q96S07 402 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 GINS3Q9BRX5 216 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 NMES1Q9C002 83 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 MLXQ9UH92 298 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 ALG5Q9Y673 324 aa13.37□□□□□ -0.27
RAPGEF3-220ENST00000549347 SIX6O95475 246 aa13.36□□□□□ -0.27
RAPGEF3-220ENST00000549347 H2BFSP57053 126 aa13.36□□□□□ -0.27
RAPGEF3-220ENST00000549347 RAB32Q13637 225 aa13.36□□□□□ -0.27
RAPGEF3-220ENST00000549347 CD300EQ496F6 205 aaPredicted RBP13.36□□□□□ -0.27
RAPGEF3-220ENST00000549347 BTNL8Q6UX41 500 aa13.36□□□□□ -0.27
RAPGEF3-220ENST00000549347 ACOT7LQ6ZUV0 252 aa13.36□□□□□ -0.27
RAPGEF3-220ENST00000549347 IGKV1D-37A0A075B6S9 117 aa13.35□□□□□ -0.27
RAPGEF3-220ENST00000549347 IZUMO1RA6ND01 250 aa13.35□□□□□ -0.27
RAPGEF3-220ENST00000549347 L7N2F9 121 aa13.35□□□□□ -0.27
RAPGEF3-220ENST00000549347 ZNF207O43670 478 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-220ENST00000549347 SCAF4O95104 1147 aaKnown RBP13.35□□□□□ -0.27
RAPGEF3-220ENST00000549347 METTL15P1P0C7V9 234 aa13.35□□□□□ -0.27
RAPGEF3-220ENST00000549347 S100A10P60903 97 aa13.35□□□□□ -0.27
RAPGEF3-220ENST00000549347 VAMP2P63027 116 aa13.35□□□□□ -0.27
RAPGEF3-220ENST00000549347 IGHV7-4-1A0A0J9YVY3 117 aa13.34□□□□□ -0.27
RAPGEF3-220ENST00000549347 CCNKO75909 580 aa13.34□□□□□ -0.27
RAPGEF3-220ENST00000549347 TOMM40O96008 361 aa13.34□□□□□ -0.27
RAPGEF3-220ENST00000549347 PVALBP20472 110 aaPredicted RBP13.34□□□□□ -0.27
RAPGEF3-220ENST00000549347 CYCSP99999 105 aaKnown RBP13.34□□□□□ -0.27
RAPGEF3-220ENST00000549347 OXA1LQ15070 435 aa13.34□□□□□ -0.27
RAPGEF3-220ENST00000549347 OR8G2PQ6IF36 304 aa13.34□□□□□ -0.27
RAPGEF3-220ENST00000549347 THAP8Q8NA92 274 aa13.34□□□□□ -0.27
RAPGEF3-220ENST00000549347 MRAPQ8TCY5 172 aa13.34□□□□□ -0.27
RAPGEF3-220ENST00000549347 MGAT4CQ9UBM8 478 aa13.34□□□□□ -0.27
RAPGEF3-220ENST00000549347 SMPXQ9UHP9 88 aa13.34□□□□□ -0.27
RAPGEF3-220ENST00000549347 IGKV1OR2-108A0A075B7D4 117 aa13.33□□□□□ -0.28
RAPGEF3-220ENST00000549347 TRAV14DV4A0A0A6YYC5 116 aa13.33□□□□□ -0.28
RAPGEF3-220ENST00000549347 ZFP92A6NM28 416 aa13.33□□□□□ -0.28
RAPGEF3-220ENST00000549347 FNDC10F2Z333 226 aa13.33□□□□□ -0.28
RAPGEF3-220ENST00000549347 DEDDO75618 318 aa13.33□□□□□ -0.28
RAPGEF3-220ENST00000549347 DLK1P80370 383 aa13.33□□□□□ -0.28
RAPGEF3-220ENST00000549347 TMEM61Q8N0U2 210 aa13.33□□□□□ -0.28
RAPGEF3-220ENST00000549347 OR10P1Q8NGE3 313 aa13.33□□□□□ -0.28
RAPGEF3-220ENST00000549347 Q8WTZ3 238 aa13.33□□□□□ -0.28
RAPGEF3-220ENST00000549347 PRKDCP78527 4128 aaKnown RBP13.33□□□□□ -0.28
RAPGEF3-220ENST00000549347 TRAV25A0A0B4J276 109 aa13.32□□□□□ -0.28
RAPGEF3-220ENST00000549347 CHEK1O14757 476 aa13.32□□□□□ -0.28
RAPGEF3-220ENST00000549347 TRGV9Q99603 122 aa13.32□□□□□ -0.28
RAPGEF3-220ENST00000549347 LYRM2Q9NU23 88 aaPredicted RBP13.32□□□□□ -0.28
RAPGEF3-220ENST00000549347 SORL1Q92673 2214 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 FABP1P07148 127 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 RD3LP0DJH9 198 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 PSG1P11464 419 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 BMI1P35226 326 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 BCAP31P51572 246 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 CAV2P51636 162 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 AKR1C1Q04828 323 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 ARL16Q0P5N6 197 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 TMEM144Q7Z5S9 345 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 WDR89Q96FK6 387 aaPredicted RBP13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 METTL26Q96S19 204 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 RHPN1-AS1Q9BWJ2 59 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 VSIRQ9H7M9 311 aa13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 LSM4Q9Y4Z0 139 aaKnown RBP13.31□□□□□ -0.28
RAPGEF3-220ENST00000549347 ZNF785A8K8V0 405 aa13.3□□□□□ -0.28
RAPGEF3-220ENST00000549347 IL4P05112 153 aa13.3□□□□□ -0.28
RAPGEF3-220ENST00000549347 CRYBB3P26998 211 aa13.3□□□□□ -0.28
RAPGEF3-220ENST00000549347 ZNF90Q03938 601 aa13.3□□□□□ -0.28
RAPGEF3-220ENST00000549347 USF2Q15853 346 aaPredicted RBP13.3□□□□□ -0.28
RAPGEF3-220ENST00000549347 LRRC37A5PQ49AS3 106 aa13.3□□□□□ -0.28
RAPGEF3-220ENST00000549347 OR51G1Q8NGK1 321 aa13.3□□□□□ -0.28
RAPGEF3-220ENST00000549347 PPP1R1CQ8WVI7 109 aa13.3□□□□□ -0.28
RAPGEF3-220ENST00000549347 GGACTQ9BVM4 153 aa13.3□□□□□ -0.28
RAPGEF3-220ENST00000549347 SELENOKQ9Y6D0 94 aa13.3□□□□□ -0.28
RAPGEF3-220ENST00000549347 IGHV3-49A0A0A0MS15 119 aa13.29□□□□□ -0.28
RAPGEF3-220ENST00000549347 IGSF23A1L1A6 192 aa13.29□□□□□ -0.28
RAPGEF3-220ENST00000549347 FAM24AA6NFZ4 105 aa13.29□□□□□ -0.28
RAPGEF3-220ENST00000549347 TSPAN4O14817 238 aa13.29□□□□□ -0.28
RAPGEF3-220ENST00000549347 APOHP02749 345 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms