RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 SCGB1C1Q8TD33 95 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 NPIPB3Q92617 1050 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 ACY3Q96HD9 319 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 SLC35E1Q96K37 410 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 GGTLC1Q9BX51 225 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 NPCDR1Q9BY65 106 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 PRSS22Q9GZN4 317 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 NPFFR1Q9GZQ6 430 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 NPVFQ9HCQ7 196 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 TIMM9Q9Y5J7 89 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 S4R3C0 116 aa6.31□□□□□ -1.4
DEPDC4-207ENST00000549249 CUBNO60494 3623 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 TRIM77I1YAP6 450 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 AGPAT2O15120 278 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 SULT1A2P50226 295 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 SCGB2A2Q13296 93 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 ETFRF1Q6IPR1 90 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 ACSM6Q6P461 480 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 TEPPQ6URK8 271 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 RBMS3Q6XE24 437 aaKnown RBP6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 TMEM182Q6ZP80 229 aaPredicted RBP6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 TMEM116Q8NCL8 245 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 OR2G3Q8NGZ4 309 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 GNPNAT1Q96EK6 184 aaPredicted RBP6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 PSMG3Q9BT73 122 aaPredicted RBP6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 VSIRQ9H7M9 311 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 FBXL7Q9UJT9 491 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 SLC45A2Q9UMX9 530 aa6.3□□□□□ -1.4
DEPDC4-207ENST00000549249 H3BUA1 57 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 MPDU1O75352 247 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 YIF1AO95070 293 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 BRI3O95415 125 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 IGHV3-23P01764 117 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 RNASE1P07998 156 aaKnown RBP6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 NMBP08949 121 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 LINC00869P0C866 280 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 IGLC1P0CG04 106 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 HIST1H1BP16401 226 aaKnown RBP6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 OR10J1P30954 320 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 ELLP55199 621 aaPredicted RBP6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 RHOGP84095 191 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 MIC13Q5XKP0 118 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 LCNL1Q6ZST4 164 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 Q6ZSV7 163 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 OR4X1Q8NH49 305 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 ZNF418Q8TF45 676 aaPredicted RBP6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 ZNF414Q96IQ9 312 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 MS4A10Q96PG2 267 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 KLK15Q9H2R5 256 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 ZNF355PQ9NSJ1 428 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 SERTAD4Q9NUC0 356 aa6.29□□□□□ -1.4
DEPDC4-207ENST00000549249 TCRBV4S1A1TA0A5B7 111 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 C17orf112F2Z3M2 114 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 CYB5BO43169 146 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 CLN5O75503 358 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 TSPAN9O75954 239 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 IGKV1-17P01599 117 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 IGHG4P01861 327 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 TRGV3P03979 118 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 GATA2P23769 480 aaPredicted RBP6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 RPL29P47914 159 aaKnown RBP6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 CAMLGP49069 296 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 FHITP49789 147 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 MFAP4P55083 255 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 RAB2AP61019 212 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 ZNF90Q03938 601 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 ZNF726P1Q15940 193 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 C15orf32Q32M92 178 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 GCSAMLQ5JQS6 135 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 CLLU1Q5K131 121 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 FFAR4Q5NUL3 377 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 EIF5AL1Q6IS14 154 aaKnown RBP6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 CYP2G1PQ6ZSU1 146 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 ZNF329Q86UD4 541 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 STPG3Q8N7X2 389 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 BPIFCQ8NFQ6 507 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 ZNF502Q8TBZ5 544 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 VN1R17PQ8TDU5 208 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 CXorf58Q96LI9 332 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 CCDC140Q96MF4 163 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 TRGV9Q99603 122 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 C21orf62Q9NYP8 219 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 THYN1Q9P016 225 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 PXMP4Q9Y6I8 212 aa6.28□□□□□ -1.4
DEPDC4-207ENST00000549249 PSMB11A5LHX3 300 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 FAM223BA6NKX1 122 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 ZFP92A6NM28 416 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 EIF3GO75821 320 aaKnown RBP eCLIP6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 PF4V1P10720 104 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 PSMB8P28062 276 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 FCGR2BP31994 310 aaPredicted RBP6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 TPPP2P59282 170 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 RPL15P61313 204 aaKnown RBP6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 B2MP61769 119 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 SERF2P84101 59 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 SRSF2Q01130 221 aaKnown RBP6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 KIAA0141Q14154 515 aaPredicted RBP6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 TIGITQ495A1 244 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 TMEM41BQ5BJD5 291 aa6.27□□□□□ -1.41
DEPDC4-207ENST00000549249 AKR1C8PQ5T2L2 129 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms