RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 PATE2Q6UY27 113 aa18.72■□□□□ 0.59
NPAS3-206ENST00000548645 ZNF841Q6ZN19 808 aa18.72■□□□□ 0.59
NPAS3-206ENST00000548645 NDUFA4L2Q9NRX3 87 aa18.72■□□□□ 0.59
NPAS3-206ENST00000548645 TP73-AS1Q9UF72 201 aa18.72■□□□□ 0.59
NPAS3-206ENST00000548645 A0A1W2PNU3 283 aaPredicted RBP18.71■□□□□ 0.59
NPAS3-206ENST00000548645 C19orf67A6NJJ6 358 aa18.71■□□□□ 0.59
NPAS3-206ENST00000548645 MYCNOSP40205 109 aa18.71■□□□□ 0.59
NPAS3-206ENST00000548645 SPRNQ5BIV9 151 aa18.71■□□□□ 0.59
NPAS3-206ENST00000548645 SLC25A48Q6ZT89 311 aaKnown RBP18.71■□□□□ 0.59
NPAS3-206ENST00000548645 PDPNQ86YL7 162 aa18.71■□□□□ 0.59
NPAS3-206ENST00000548645 GPR82Q96P67 336 aa18.71■□□□□ 0.59
NPAS3-206ENST00000548645 TCRBV4S1A1TA0A5B7 111 aa18.7■□□□□ 0.58
NPAS3-206ENST00000548645 SLC25A5P05141 298 aaKnown RBP18.7■□□□□ 0.58
NPAS3-206ENST00000548645 SSBP2P81877 361 aaPredicted RBP18.7■□□□□ 0.58
NPAS3-206ENST00000548645 ERASQ7Z444 233 aa18.7■□□□□ 0.58
NPAS3-206ENST00000548645 M0QZ24 198 aa18.7■□□□□ 0.58
NPAS3-206ENST00000548645 TOX4O94842 621 aa18.7■□□□□ 0.58
NPAS3-206ENST00000548645 CT83Q5H943 113 aa18.7■□□□□ 0.58
NPAS3-206ENST00000548645 OSR1Q8TAX0 266 aaPredicted RBP18.7■□□□□ 0.58
NPAS3-206ENST00000548645 OR5AL1P0C617 328 aa18.7■□□□□ 0.58
NPAS3-206ENST00000548645 LINC00173Q6ZV60 143 aa18.7■□□□□ 0.58
NPAS3-206ENST00000548645 UBALD2Q8IYN6 164 aa18.7■□□□□ 0.58
NPAS3-206ENST00000548645 CST9LQ9H4G1 147 aa18.7■□□□□ 0.58
NPAS3-206ENST00000548645 KLF12Q9Y4X4 402 aa18.7■□□□□ 0.58
NPAS3-206ENST00000548645 HEATR1Q9H583 2144 aaKnown RBP18.69■□□□□ 0.58
NPAS3-206ENST00000548645 MSMPQ1L6U9 139 aa18.69■□□□□ 0.58
NPAS3-206ENST00000548645 TMEM30BQ3MIR4 351 aa18.69■□□□□ 0.58
NPAS3-206ENST00000548645 FAM201AQ5SY85 155 aa18.69■□□□□ 0.58
NPAS3-206ENST00000548645 ETFRF1Q6IPR1 90 aa18.69■□□□□ 0.58
NPAS3-206ENST00000548645 STXBP6Q8NFX7 210 aa18.69■□□□□ 0.58
NPAS3-206ENST00000548645 LAMTOR5O43504 91 aa18.69■□□□□ 0.58
NPAS3-206ENST00000548645 NPIPB3Q92617 1050 aa18.69■□□□□ 0.58
NPAS3-206ENST00000548645 INS-IGF2F8WCM5 200 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 LIPFP07098 398 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 PRR31Q5SQ13 230 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 LDLRAD2Q5SZI1 272 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 RBMXL3Q8N7X1 1067 aaKnown RBP18.68■□□□□ 0.58
NPAS3-206ENST00000548645 MAP1LC3CQ9BXW4 147 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 PRSS22Q9GZN4 317 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 MUC21A0A0G2JKD1 596 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 MUC21A0A140T8X8 626 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 MUC21Q5SSG8 566 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 PET117Q6UWS5 81 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 LINC00305Q7Z4B0 112 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 ITLN1Q8WWA0 313 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 HARBI1Q96MB7 349 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 VPS25Q9BRG1 176 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 RPUSD1Q9UJJ7 312 aaKnown RBP18.68■□□□□ 0.58
NPAS3-206ENST00000548645 RNF24Q9Y225 148 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 DSCAML1Q8TD84 2053 aa18.68■□□□□ 0.58
NPAS3-206ENST00000548645 OR2T8A6NH00 312 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 FSTL3O95633 263 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 P01737 135 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 OCIAD2Q56VL3 154 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 C9orf106Q8NAJ2 232 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 FAM222BQ8WU58 562 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 RND1Q92730 232 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 SGK494Q96LW2 274 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 MLST8Q9BVC4 326 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 LINC00574Q9H8X3 128 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 HLA-DRB1P01911 266 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 APOA2P02652 100 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 PSG1P11464 419 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 DUX4L9Q6RFH8 374 aaPredicted RBP18.67■□□□□ 0.58
NPAS3-206ENST00000548645 SMIM15Q7Z3B0 74 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 MS4A6AQ9H2W1 248 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 SCRT2Q9NQ03 307 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 PGPA6NDG6 321 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 SPRY3O43610 288 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 IGHG3P01860 377 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 PGLYRP4Q96LB8 373 aa18.67■□□□□ 0.58
NPAS3-206ENST00000548645 FNDC4Q9H6D8 234 aaPredicted RBP18.67■□□□□ 0.58
NPAS3-206ENST00000548645 PCNX2A6NKB5 2137 aa18.66■□□□□ 0.58
NPAS3-206ENST00000548645 MOSP00540 346 aa18.66■□□□□ 0.58
NPAS3-206ENST00000548645 SUB1P53999 127 aaKnown RBP eCLIP18.66■□□□□ 0.58
NPAS3-206ENST00000548645 GTSF1Q8WW33 167 aa18.66■□□□□ 0.58
NPAS3-206ENST00000548645 ZNF492Q9P255 531 aa18.66■□□□□ 0.58
NPAS3-206ENST00000548645 CBY3A6NI87 242 aa18.66■□□□□ 0.58
NPAS3-206ENST00000548645 THAP8Q8NA92 274 aa18.66■□□□□ 0.58
NPAS3-206ENST00000548645 BLNKQ8WV28 456 aa18.66■□□□□ 0.58
NPAS3-206ENST00000548645 NDFIP1Q9BT67 221 aa18.66■□□□□ 0.58
NPAS3-206ENST00000548645 GFRA4Q9GZZ7 299 aa18.66■□□□□ 0.58
NPAS3-206ENST00000548645 DSCAMO60469 2012 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 IGKV1D-37A0A075B6S9 117 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 TM4SF5O14894 197 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 CD5LO43866 347 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 PLAUP00749 431 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 CD24P25063 80 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 AMMECR1LQ6DCA0 310 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 RBPMS2Q6ZRY4 209 aaKnown RBP18.65■□□□□ 0.58
NPAS3-206ENST00000548645 PERPQ96FX8 193 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 RPH3ALQ9UNE2 315 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 LINC00322Q6ZN03 302 aaPredicted RBP18.65■□□□□ 0.58
NPAS3-206ENST00000548645 DAZAP1Q96EP5 407 aaKnown RBP18.65■□□□□ 0.58
NPAS3-206ENST00000548645 PLSCR4Q9NRQ2 329 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 ZNRD1Q9P1U0 126 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 TANC2Q9HCD6 1990 aa18.65■□□□□ 0.58
NPAS3-206ENST00000548645 HIST1H1AQ02539 215 aaPredicted RBP18.64■□□□□ 0.58
NPAS3-206ENST00000548645 FAM169BQ8N8A8 192 aa18.64■□□□□ 0.58
NPAS3-206ENST00000548645 FMC1Q96HJ9 113 aa18.64■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms