RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 TRAV5A0A0B4J249 113 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 CENPVL3A0A0U1RRI6 287 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 SCO2A0A1W2PP80 73 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 NPFFO15130 113 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 FAM106CPP0CH98 169 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 BPIFB3P59826 476 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 NDPQ00604 133 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 CTDSP1Q9GZU7 261 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 EPG5Q9HCE0 2579 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 IGHV4-30-2A0A087WSY4 118 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 ASPHD1Q5U4P2 390 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 Q8WTZ3 238 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 ARPC1AQ92747 370 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 ZNF355PQ9NSJ1 428 aa16.57■□□□□ 0.24
RITA1-201ENST00000548278 CLDN34H7C241 214 aa16.56■□□□□ 0.24
RITA1-201ENST00000548278 K7EIM0 57 aa16.56■□□□□ 0.24
RITA1-201ENST00000548278 OR1L6Q8NGR2 347 aa16.56■□□□□ 0.24
RITA1-201ENST00000548278 C11orf52Q96A22 123 aa16.56■□□□□ 0.24
RITA1-201ENST00000548278 UHRF2Q96PU4 802 aa16.56■□□□□ 0.24
RITA1-201ENST00000548278 SSX3Q99909 188 aa16.56■□□□□ 0.24
RITA1-201ENST00000548278 GSX1Q9H4S2 264 aaPredicted RBP16.56■□□□□ 0.24
RITA1-201ENST00000548278 URGCP-MRPS24S4R325 110 aa16.56■□□□□ 0.24
RITA1-201ENST00000548278 OR10J4P0C629 311 aa16.55■□□□□ 0.24
RITA1-201ENST00000548278 BRS3P32247 399 aa16.55■□□□□ 0.24
RITA1-201ENST00000548278 ELOA3CA0A087WX78 387 aaPredicted RBP16.55■□□□□ 0.24
RITA1-201ENST00000548278 IGLC1P0CG04 106 aa16.55■□□□□ 0.24
RITA1-201ENST00000548278 Q8N9W7 124 aa16.55■□□□□ 0.24
RITA1-201ENST00000548278 OR5AU1Q8NGC0 362 aa16.55■□□□□ 0.24
RITA1-201ENST00000548278 NRGNQ92686 78 aa16.55■□□□□ 0.24
RITA1-201ENST00000548278 PERPQ96FX8 193 aa16.55■□□□□ 0.24
RITA1-201ENST00000548278 SVEP1Q4LDE5 3571 aa16.55■□□□□ 0.24
RITA1-201ENST00000548278 UBR5O95071 2799 aaPredicted RBP16.54■□□□□ 0.24
RITA1-201ENST00000548278 NPIPB5A8MRT5 1133 aa16.54■□□□□ 0.24
RITA1-201ENST00000548278 CXCL1P09341 107 aa16.54■□□□□ 0.24
RITA1-201ENST00000548278 LINC01551Q86U37 167 aa16.54■□□□□ 0.24
RITA1-201ENST00000548278 ZFP82Q8N141 532 aa16.54■□□□□ 0.24
RITA1-201ENST00000548278 UTP20O75691 2785 aaKnown RBP16.54■□□□□ 0.24
RITA1-201ENST00000548278 C16orf82Q7Z2V1 217 aa16.54■□□□□ 0.24
RITA1-201ENST00000548278 C1RLQ9NZP8 487 aa16.54■□□□□ 0.24
RITA1-201ENST00000548278 VPS13CQ709C8 3753 aa16.53■□□□□ 0.24
RITA1-201ENST00000548278 TRBV20OR9-2A0A075B6H5 130 aa16.53■□□□□ 0.24
RITA1-201ENST00000548278 C1orf196B1AJZ1 125 aa16.53■□□□□ 0.24
RITA1-201ENST00000548278 PAX1P15863 534 aa16.53■□□□□ 0.24
RITA1-201ENST00000548278 ORM2P19652 201 aa16.53■□□□□ 0.24
RITA1-201ENST00000548278 PLP1P60201 277 aa16.53■□□□□ 0.24
RITA1-201ENST00000548278 KLF17Q5JT82 389 aaPredicted RBP16.53■□□□□ 0.24
RITA1-201ENST00000548278 LINC00305Q7Z4B0 112 aa16.53■□□□□ 0.24
RITA1-201ENST00000548278 TTC9CQ8N5M4 171 aa16.53■□□□□ 0.24
RITA1-201ENST00000548278 OR1B1Q8NGR6 318 aa16.53■□□□□ 0.24
RITA1-201ENST00000548278 TGIF2-C20orf24A0A0A6YYL0 155 aa16.52■□□□□ 0.24
RITA1-201ENST00000548278 IGHV7-81A0A0B4J1V7 117 aa16.52■□□□□ 0.24
RITA1-201ENST00000548278 EGR2P11161 476 aaPredicted RBP16.52■□□□□ 0.24
RITA1-201ENST00000548278 COX6B1P14854 86 aa16.52■□□□□ 0.24
RITA1-201ENST00000548278 UBE2L3P68036 154 aaKnown RBP16.52■□□□□ 0.24
RITA1-201ENST00000548278 FANCD2OSQ96PS1 177 aa16.52■□□□□ 0.24
RITA1-201ENST00000548278 FAM208BQ5VWN6 2430 aa16.52■□□□□ 0.24
RITA1-201ENST00000548278 A0A1W2PRE2 83 aa16.52■□□□□ 0.23
RITA1-201ENST00000548278 RAB5BP61020 215 aa16.52■□□□□ 0.23
RITA1-201ENST00000548278 PAXXQ9BUH6 204 aa16.52■□□□□ 0.23
RITA1-201ENST00000548278 IGLV11-55A0A075B6I3 123 aa16.51■□□□□ 0.23
RITA1-201ENST00000548278 GGTLC3B5MD39 225 aa16.51■□□□□ 0.23
RITA1-201ENST00000548278 HLA-DRB1P01911 266 aa16.51■□□□□ 0.23
RITA1-201ENST00000548278 PYYP10082 97 aa16.51■□□□□ 0.23
RITA1-201ENST00000548278 C2CD4CQ8TF44 421 aa16.51■□□□□ 0.23
RITA1-201ENST00000548278 HYPMO75409 117 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 IGKV1-17P01599 117 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 PSG1P11464 419 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 TIGITQ495A1 244 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 RBM14Q96PK6 669 aaKnown RBP16.5■□□□□ 0.23
RITA1-201ENST00000548278 OR51M1Q9H341 326 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 LRRK2Q5S007 2527 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 IGHV1-69DA0A0B4J2H0 117 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 PGPEP1LA6NFU8 196 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 IGHV1-69P01742 117 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 FXYD5Q96DB9 178 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 ANAPC16Q96DE5 110 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 AURKAIP1Q9NWT8 199 aaPredicted RBP16.5■□□□□ 0.23
RITA1-201ENST00000548278 CRYBG3Q68DQ2 2970 aa16.5■□□□□ 0.23
RITA1-201ENST00000548278 IGHV3OR16-10A0A075B7F0 116 aa16.49■□□□□ 0.23
RITA1-201ENST00000548278 A1L4Q6 167 aa16.49■□□□□ 0.23
RITA1-201ENST00000548278 H7BYZ3 331 aa16.49■□□□□ 0.23
RITA1-201ENST00000548278 C1QL4Q86Z23 238 aa16.49■□□□□ 0.23
RITA1-201ENST00000548278 OR5T1Q8NG75 326 aa16.49■□□□□ 0.23
RITA1-201ENST00000548278 RASL11BQ9BPW5 248 aa16.49■□□□□ 0.23
RITA1-201ENST00000548278 CRYBB3P26998 211 aa16.49■□□□□ 0.23
RITA1-201ENST00000548278 DSCR9P59020 149 aa16.49■□□□□ 0.23
RITA1-201ENST00000548278 HSPB9Q9BQS6 159 aa16.49■□□□□ 0.23
RITA1-201ENST00000548278 CSMD1Q96PZ7 3565 aa16.48■□□□□ 0.23
RITA1-201ENST00000548278 RPL35P42766 123 aaKnown RBP16.48■□□□□ 0.23
RITA1-201ENST00000548278 RPS10P46783 165 aaKnown RBP16.48■□□□□ 0.23
RITA1-201ENST00000548278 SUMO1P63165 101 aaKnown RBP16.48■□□□□ 0.23
RITA1-201ENST00000548278 C9JCJ5 164 aa16.47■□□□□ 0.23
RITA1-201ENST00000548278 PFN1P07737 140 aaKnown RBP16.47■□□□□ 0.23
RITA1-201ENST00000548278 STXBP6Q8NFX7 210 aa16.47■□□□□ 0.23
RITA1-201ENST00000548278 OCC1Q8TAD7 63 aa16.47■□□□□ 0.23
RITA1-201ENST00000548278 TRBV24-1A0A075B6N3 115 aa16.47■□□□□ 0.23
RITA1-201ENST00000548278 TRAV40A0A0B4J280 105 aa16.47■□□□□ 0.23
RITA1-201ENST00000548278 MSMBP08118 114 aa16.47■□□□□ 0.23
RITA1-201ENST00000548278 CD99P14209 185 aa16.47■□□□□ 0.23
RITA1-201ENST00000548278 FAM210BQ96KR6 192 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms