RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 TM2D3Q9BRN9 247 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 RHPN1-AS1Q9BWJ2 59 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 TUBA4BQ9H853 241 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 PTTG2Q9NZH5 202 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 PUS1Q9Y606 427 aaKnown RBP eCLIP8.89□□□□□ -0.99
YBX3-217ENST00000546164 SELENOKQ9Y6D0 94 aa8.89□□□□□ -0.99
YBX3-217ENST00000546164 OR11H12B2RN74 326 aa8.88□□□□□ -0.99
YBX3-217ENST00000546164 ZNF207O43670 478 aaKnown RBP8.88□□□□□ -0.99
YBX3-217ENST00000546164 MED6O75586 246 aa8.88□□□□□ -0.99
YBX3-217ENST00000546164 HOXB5P09067 269 aa8.88□□□□□ -0.99
YBX3-217ENST00000546164 ANXA7P20073 488 aaKnown RBP8.88□□□□□ -0.99
YBX3-217ENST00000546164 BMI1P35226 326 aa8.88□□□□□ -0.99
YBX3-217ENST00000546164 RND2P52198 227 aa8.88□□□□□ -0.99
YBX3-217ENST00000546164 OR1S2Q8NGQ3 325 aa8.88□□□□□ -0.99
YBX3-217ENST00000546164 WWC2-AS2Q96NR7 200 aa8.88□□□□□ -0.99
YBX3-217ENST00000546164 CIB3Q96Q77 187 aaPredicted RBP8.88□□□□□ -0.99
YBX3-217ENST00000546164 C20orf85Q9H1P6 137 aa8.88□□□□□ -0.99
YBX3-217ENST00000546164 VSIRQ9H7M9 311 aa8.88□□□□□ -0.99
YBX3-217ENST00000546164 CD5P06127 495 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 GPX4P36969 197 aaPredicted RBP8.87□□□□□ -0.99
YBX3-217ENST00000546164 YPEL3P61236 119 aaPredicted RBP8.87□□□□□ -0.99
YBX3-217ENST00000546164 HAGHQ16775 308 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 LINC01559Q495D7 138 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 C4orf46Q504U0 113 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 FAM90A2PQ658T7 463 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 DEFB125Q8N687 156 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 MITD1Q8WV92 249 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 RCHY1Q96PM5 261 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 RNF2Q99496 336 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 FAM110AQ9BQ89 295 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 WFDC10AQ9H1F0 79 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 ZMAT4Q9H898 229 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 BATF3Q9NR55 127 aa8.87□□□□□ -0.99
YBX3-217ENST00000546164 KMT2CQ8NEZ4 4911 aaKnown RBP8.86□□□□□ -0.99
YBX3-217ENST00000546164 OR4C46A6NHA9 309 aa8.86□□□□□ -0.99
YBX3-217ENST00000546164 SYNGR2O43760 224 aa8.86□□□□□ -0.99
YBX3-217ENST00000546164 ADAP1O75689 374 aa8.86□□□□□ -0.99
YBX3-217ENST00000546164 TCRBP04435 133 aa8.86□□□□□ -0.99
YBX3-217ENST00000546164 IFNA4P05014 189 aa8.86□□□□□ -0.99
YBX3-217ENST00000546164 OR10J1P30954 320 aa8.86□□□□□ -0.99
YBX3-217ENST00000546164 ID3Q02535 119 aa8.86□□□□□ -0.99
YBX3-217ENST00000546164 TIGITQ495A1 244 aa8.86□□□□□ -0.99
YBX3-217ENST00000546164 WDR12Q9GZL7 423 aaKnown RBP8.86□□□□□ -0.99
YBX3-217ENST00000546164 SRD5A3Q9H8P0 318 aa8.86□□□□□ -0.99
YBX3-217ENST00000546164 A0A1W2PS18 150 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 RBMY1BA6NDE4 496 aaKnown RBP8.85□□□□□ -0.99
YBX3-217ENST00000546164 RBMY1EA6NEQ0 496 aaKnown RBP8.85□□□□□ -0.99
YBX3-217ENST00000546164 MPTX1A8MV57 137 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 IFNA21P01568 189 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 RBMY1DP0C7P1 496 aaKnown RBP8.85□□□□□ -0.99
YBX3-217ENST00000546164 IAPPP10997 89 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 NPPCP23582 126 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 CRYBB3P26998 211 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 RAB11AP62491 216 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 RPP30P78346 268 aaKnown RBP8.85□□□□□ -0.99
YBX3-217ENST00000546164 ASAH1Q13510 395 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 OR4D5Q8NGN0 318 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 Q8WTZ3 238 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 ST8SIA2Q92186 375 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 NPIPB3Q92617 1050 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 ACY3Q96HD9 319 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 METTL26Q96S19 204 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 SPATA25Q9BR10 227 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 TMEM231Q9H6L2 316 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 TBC1D24Q9ULP9 559 aa8.85□□□□□ -0.99
YBX3-217ENST00000546164 IGHV3OR16-13A0A075B7E8 117 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 IGHV3-49A0A0A0MS15 119 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 IGHV3-74A0A0B4J1X5 117 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 TRAV2A0A0B4J234 112 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 TOMM40O96008 361 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 APOHP02749 345 aaPredicted RBP8.84□□□□□ -0.99
YBX3-217ENST00000546164 NKX2-1P43699 371 aaPredicted RBP8.84□□□□□ -0.99
YBX3-217ENST00000546164 GAMTQ14353 236 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 ZNF846Q147U1 533 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 ODF3L2Q3SX64 289 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 TCF24Q7RTU0 167 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 LILRB2Q8N423 598 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 SLC35E1Q96K37 410 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 MAGT1Q9H0U3 335 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 NUDT15Q9NV35 164 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 U3KQE9 123 aa8.84□□□□□ -0.99
YBX3-217ENST00000546164 TRAV6A0A075B6T7 132 aa8.83□□□□□ -1
YBX3-217ENST00000546164 FAM240BA0A1B0GVZ2 78 aa8.83□□□□□ -1
YBX3-217ENST00000546164 PRSS46E5RG02 174 aa8.83□□□□□ -1
YBX3-217ENST00000546164 WRBO00258 174 aa8.83□□□□□ -1
YBX3-217ENST00000546164 UPK1BO75841 260 aa8.83□□□□□ -1
YBX3-217ENST00000546164 RD3LP0DJH9 198 aa8.83□□□□□ -1
YBX3-217ENST00000546164 LORP23490 312 aaPredicted RBP8.83□□□□□ -1
YBX3-217ENST00000546164 CMC4P56277 68 aaPredicted RBP8.83□□□□□ -1
YBX3-217ENST00000546164 MZT2BQ6NZ67 158 aa8.83□□□□□ -1
YBX3-217ENST00000546164 ZNF431Q8TF32 576 aaPredicted RBP8.83□□□□□ -1
YBX3-217ENST00000546164 CITED4Q96RK1 184 aa8.83□□□□□ -1
YBX3-217ENST00000546164 IGKV1D-37A0A075B6S9 117 aa8.82□□□□□ -1
YBX3-217ENST00000546164 LOC102724200A0A096LPH7 203 aaPredicted RBP8.82□□□□□ -1
YBX3-217ENST00000546164 DFFBO76075 338 aa8.82□□□□□ -1
YBX3-217ENST00000546164 H2AFB2P0C5Z0 115 aa8.82□□□□□ -1
YBX3-217ENST00000546164 PSG1P11464 419 aa8.82□□□□□ -1
YBX3-217ENST00000546164 POLR2GP62487 172 aaKnown RBP eCLIP8.82□□□□□ -1
YBX3-217ENST00000546164 PAFAH1B2P68402 229 aa8.82□□□□□ -1
YBX3-217ENST00000546164 USF2Q15853 346 aaPredicted RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms