RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 SGK494Q96LW2 274 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 FER1L6-AS2Q96M78 137 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 EPDR1Q9UM22 224 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 RPH3ALQ9UNE2 315 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 SOX21Q9Y651 276 aaPredicted RBP11.5□□□□□ -0.57
SRP54-202ENST00000546080 BDP1A6H8Y1 2624 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 A8MWL6 223 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 IGLV1-44P01699 117 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 FAM201AQ5SY85 155 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 PATE2Q6UY27 113 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 PDPNQ86YL7 162 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 RBMXL3Q8N7X1 1067 aaKnown RBP11.5□□□□□ -0.57
SRP54-202ENST00000546080 TMEM178AQ8NBL3 297 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 MAP1LC3CQ9BXW4 147 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 SCRT2Q9NQ03 307 aa11.5□□□□□ -0.57
SRP54-202ENST00000546080 NCOR1O75376 2440 aa11.49□□□□□ -0.57
SRP54-202ENST00000546080 AMMECR1LQ6DCA0 310 aa11.49□□□□□ -0.57
SRP54-202ENST00000546080 RND1Q92730 232 aa11.49□□□□□ -0.57
SRP54-202ENST00000546080 PGLYRP4Q96LB8 373 aa11.49□□□□□ -0.57
SRP54-202ENST00000546080 GPR82Q96P67 336 aa11.49□□□□□ -0.57
SRP54-202ENST00000546080 VPS13AQ96RL7 3174 aa11.49□□□□□ -0.57
SRP54-202ENST00000546080 TCRBV4S1A1TA0A5B7 111 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 PLAUP00749 431 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 P01737 135 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 LIPFP07098 398 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 KIR2DL2P43627 348 aaPredicted RBP11.48□□□□□ -0.57
SRP54-202ENST00000546080 GUSBP1Q15486 140 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 DUX4L9Q6RFH8 374 aaPredicted RBP11.48□□□□□ -0.57
SRP54-202ENST00000546080 LINC00305Q7Z4B0 112 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 BLNKQ8WV28 456 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 NPIPB3Q92617 1050 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 HARBI1Q96MB7 349 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 NDUFA4L2Q9NRX3 87 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 PGPA6NDG6 321 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 OR5AL1P0C617 328 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 MYCNOSP40205 109 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 MSMPQ1L6U9 139 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 CT83Q5H943 113 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 PET117Q6UWS5 81 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 SLC25A48Q6ZT89 311 aaKnown RBP11.48□□□□□ -0.57
SRP54-202ENST00000546080 ZNRD1Q9P1U0 126 aa11.48□□□□□ -0.57
SRP54-202ENST00000546080 A0A1W2PNU3 283 aaPredicted RBP11.47□□□□□ -0.57
SRP54-202ENST00000546080 H0Y8G0 127 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 CHEK1O14757 476 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 SPRY3O43610 288 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 CD5LO43866 347 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 MOSP00540 346 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 LHBP01229 141 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 HLA-DRB1P01911 266 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 ZNF137PP52743 207 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 HIST1H1AQ02539 215 aaPredicted RBP11.47□□□□□ -0.57
SRP54-202ENST00000546080 GTSF1Q8WW33 167 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 ITLN1Q8WWA0 313 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 MS4A6AQ9H2W1 248 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 FAM186AA6NE01 2351 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 IGHV3-48P01763 117 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 APOA2P02652 100 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 TMEM177Q53S58 311 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 LINC00322Q6ZN03 302 aaPredicted RBP11.47□□□□□ -0.57
SRP54-202ENST00000546080 C9orf106Q8NAJ2 232 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 STXBP6Q8NFX7 210 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 OSR1Q8TAX0 266 aaPredicted RBP11.47□□□□□ -0.57
SRP54-202ENST00000546080 DAZAP1Q96EP5 407 aaKnown RBP11.47□□□□□ -0.57
SRP54-202ENST00000546080 FNDC4Q9H6D8 234 aaPredicted RBP11.47□□□□□ -0.57
SRP54-202ENST00000546080 HSPB8Q9UJY1 196 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 KLF12Q9Y4X4 402 aa11.47□□□□□ -0.57
SRP54-202ENST00000546080 DMDP11532 3685 aa11.46□□□□□ -0.57
SRP54-202ENST00000546080 FSTL3O95633 263 aa11.46□□□□□ -0.57
SRP54-202ENST00000546080 PSG9Q00887 426 aa11.46□□□□□ -0.57
SRP54-202ENST00000546080 ALKBH2Q6NS38 261 aa11.46□□□□□ -0.57
SRP54-202ENST00000546080 RBPMS2Q6ZRY4 209 aaKnown RBP11.46□□□□□ -0.57
SRP54-202ENST00000546080 PERPQ96FX8 193 aa11.46□□□□□ -0.57
SRP54-202ENST00000546080 MLST8Q9BVC4 326 aa11.46□□□□□ -0.57
SRP54-202ENST00000546080 PRSS22Q9GZN4 317 aa11.46□□□□□ -0.57
SRP54-202ENST00000546080 RPUSD1Q9UJJ7 312 aaKnown RBP11.46□□□□□ -0.57
SRP54-202ENST00000546080 IGKV1D-37A0A075B6S9 117 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 A0A087X0K7 114 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 LOC102724200A0A096LPH7 203 aaPredicted RBP11.45□□□□□ -0.58
SRP54-202ENST00000546080 ATP1A1-AS1Q5TC04 95 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 FMC1Q96HJ9 113 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 NDFIP1Q9BT67 221 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 MCRIP2Q9BUT9 160 aaKnown RBP11.45□□□□□ -0.58
SRP54-202ENST00000546080 ZNF492Q9P255 531 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 C19orf71A6NCJ1 209 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 E7EUB6 86 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 INS-IGF2F8WCM5 200 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 LAMTOR5O43504 91 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 ORM2P19652 201 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 SUB1P53999 127 aaKnown RBP eCLIP11.45□□□□□ -0.58
SRP54-202ENST00000546080 LPAL2Q16609 132 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 TMEM30BQ3MIR4 351 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 THAP8Q8NA92 274 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 DEFB108BQ8NET1 73 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 H1FXQ92522 213 aaKnown RBP11.45□□□□□ -0.58
SRP54-202ENST00000546080 MRPL20Q9BYC9 149 aaKnown RBP11.45□□□□□ -0.58
SRP54-202ENST00000546080 GFRA4Q9GZZ7 299 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 PEF1Q9UBV8 284 aaKnown RBP11.45□□□□□ -0.58
SRP54-202ENST00000546080 SSUH2Q9Y2M2 353 aa11.45□□□□□ -0.58
SRP54-202ENST00000546080 MED13Q9UHV7 2174 aa11.44□□□□□ -0.58
SRP54-202ENST00000546080 GPR183P32249 361 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms