RNA–Protein interactions for RNA: ENST00000544639.1

RAP1B-231, Transcript of RAP1B, member of RAS oncogene family, human

TSL 4

Gene RAP1B, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-231	ENST00000544639	NHP2	Q9NX24	153 aa	Known RBP	0.74	□□□□□ -2.29
RAP1B-231	ENST00000544639	CYSLTR1	Q9Y271	337 aa		0.74	□□□□□ -2.29
RAP1B-231	ENST00000544639	HS3ST2	Q9Y278	367 aa		0.74	□□□□□ -2.29
RAP1B-231	ENST00000544639	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	hADV38S2	A0JD32	116 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	INE1	O15225	51 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	PROSC	O94903	275 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	ZNF682	O95780	498 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	OR4E1	P0C645	316 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	PRB4	P10163	310 aa	Predicted RBP	0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	YPEL3	P61236	119 aa	Predicted RBP	0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	DEFB113	Q30KQ7	82 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	C12orf74	Q32Q52	190 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	GDF5OS	Q5U4N7	250 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	OR6V1	Q8N148	313 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	CT55	Q8WUE5	264 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	C2orf50	Q96LR7	162 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	CMSS1	Q9BQ75	279 aa	Known RBP	0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	EPDR1	Q9UM22	224 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	SLC35A3	Q9Y2D2	325 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	ADGRB2	O60241	1585 aa		0.73	□□□□□ -2.29
RAP1B-231	ENST00000544639	DENND4C	Q5VZ89	1909 aa		0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	SBF1	O95248	1867 aa		0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	TRAV3	A0A0B4J244	114 aa		0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	RPP14	O95059	124 aa	Known RBP	0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	RPS17	P08708	135 aa	Known RBP	0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	CASP1	P29466	404 aa		0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	RAN	P62826	216 aa	Known RBP	0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	AES	Q08117	197 aa		0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	C3orf56	Q8N813	242 aa		0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	GDPD1	Q8N9F7	314 aa		0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	CTNNBIP1	Q9NSA3	81 aa	Predicted RBP	0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	MED12	Q93074	2177 aa		0.72	□□□□□ -2.29
RAP1B-231	ENST00000544639	DOCK3	Q8IZD9	2030 aa		0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639		A0A087X0T9	212 aa		0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	C7orf71	A4D174	169 aa		0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	SMIM9	A6NGZ8	99 aa		0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	CEBPG	P53567	150 aa		0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	LSM6	P62312	80 aa	Known RBP	0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	ITGB3BP	Q13352	177 aa	Predicted RBP	0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	WFDC5	Q8TCV5	224 aa		0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	ADAT3	Q96EY9	351 aa	Predicted RBP	0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	RNASE7	Q9H1E1	156 aa	Known RBP	0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	OR51V1	Q9H2C8	321 aa		0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	C14orf105	Q9NVL8	296 aa		0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	RASL12	Q9NYN1	266 aa		0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	LAMA4	Q16363	1823 aa		0.71	□□□□□ -2.3
RAP1B-231	ENST00000544639	MCM3AP	O60318	1980 aa		0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639	PLB1	Q6P1J6	1458 aa		0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639	hCG_1818297	A0A087WSY0	165 aa		0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639		A8MT66	165 aa		0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639	TCRB	P04435	133 aa		0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639	EDDM3A	Q14507	147 aa		0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639	TSN	Q15631	228 aa	Known RBP	0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639	BRMS1L	Q5PSV4	323 aa		0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639	OR8D4	Q8NGM9	314 aa		0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639	UQCC1	Q9NVA1	299 aa		0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639	PRELID3B	Q9Y3B1	194 aa		0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639		V9GYY5	206 aa	Predicted RBP	0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639	SCN10A	Q9Y5Y9	1956 aa		0.7	□□□□□ -2.3
RAP1B-231	ENST00000544639	SMIM17	P0DL12	118 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	PPIB	P23284	216 aa	Known RBP	0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	HIST1H3A	P68431	136 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	H3F3A	P84243	136 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	ESRG	Q1W209	222 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	RGS21	Q2M5E4	152 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	TEX261	Q6UWH6	196 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	SOSTDC1	Q6X4U4	206 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	LCA10	Q71F78	164 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	C4orf3	Q8WVX3	66 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	HIST1H2BL	Q99880	126 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	TRIM4	Q9C037	500 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	CDC42SE1	Q9NRR8	79 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	UBAP1	Q9NZ09	502 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	UTP11	Q9Y3A2	253 aa	Known RBP	0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639		U3KQ87	197 aa		0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	MED1	Q15648	1581 aa	Predicted RBP	0.69	□□□□□ -2.3
RAP1B-231	ENST00000544639	ZNF736	B4DX44	427 aa	Predicted RBP	0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	CLDN25	C9JDP6	229 aa		0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	ZFYVE9	O95405	1425 aa		0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	SERPINE1	P05121	402 aa		0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	C8G	P07360	202 aa		0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	ZNF25	P17030	456 aa	Predicted RBP	0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	AP3S2	P59780	193 aa		0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	MPV17L	Q2QL34	196 aa		0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639		Q6Q795	121 aa		0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	SLC25A40	Q8TBP6	338 aa		0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	TEX47	Q8TBZ9	253 aa		0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	RNF122	Q9H9V4	155 aa		0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	IDI2-AS1	Q9NZ38	188 aa		0.68	□□□□□ -2.3
RAP1B-231	ENST00000544639	CNTRL	Q7Z7A1	2325 aa		0.67	□□□□□ -2.3
RAP1B-231	ENST00000544639	TAF1L	Q8IZX4	1826 aa		0.67	□□□□□ -2.3
RAP1B-231	ENST00000544639	CCDC160	A6NGH7	325 aa		0.67	□□□□□ -2.3
RAP1B-231	ENST00000544639	C1orf196	B1AJZ1	125 aa		0.67	□□□□□ -2.3
RAP1B-231	ENST00000544639	PDE6D	O43924	150 aa		0.67	□□□□□ -2.3
RAP1B-231	ENST00000544639	HAND1	O96004	215 aa		0.67	□□□□□ -2.3
RAP1B-231	ENST00000544639	CLECL1	Q8IZS7	167 aa		0.67	□□□□□ -2.3
RAP1B-231	ENST00000544639	LINC00301	Q8NCQ3	95 aa		0.67	□□□□□ -2.3
RAP1B-231	ENST00000544639	AMELY	Q99218	206 aa		0.67	□□□□□ -2.3
RAP1B-231	ENST00000544639	BCL2L10	Q9HD36	194 aa		0.67	□□□□□ -2.3

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