RNA–Protein interactions for RNA: ENST00000544501.1

YBX3-214, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 181 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-214ENST00000544501 OR10K2Q6IF99 312 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 SPATA24Q86W54 205 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 CRLF3Q8IUI8 442 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 BLIDQ8IZY5 108 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 ST6GALNAC3Q8NDV1 305 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 OR8B12Q8NGG6 310 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 RETNLBQ9BQ08 111 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 HSPB9Q9BQS6 159 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 TMEM222Q9H0R3 208 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 C8orf4Q9NR00 106 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 SLC2A9Q9NRM0 540 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 NRBP2Q9NSY0 501 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 EMC3Q9P0I2 261 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 UNC13CQ8NB66 2214 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 NAV1Q8NEY1 1877 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 DSCAMO60469 2012 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 MYH2Q9UKX2 1941 aa0.62□□□□□ -2.31
YBX3-214ENST00000544501 MDC1Q14676 2089 aaKnown RBP0.61□□□□□ -2.31
YBX3-214ENST00000544501 TNRC6AQ8NDV7 1962 aaKnown RBP0.61□□□□□ -2.31
YBX3-214ENST00000544501 CHD5Q8TDI0 1954 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 NUP210Q8TEM1 1887 aaPredicted RBP0.61□□□□□ -2.31
YBX3-214ENST00000544501 IGHV3-64A0A075B6Q5 118 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 TMEM213A2RRL7 107 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 METTL15A6NJ78 407 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 A8MUN3 132 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 MRASO14807 208 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 TOX3O15405 576 aaPredicted RBP0.61□□□□□ -2.31
YBX3-214ENST00000544501 CCL16O15467 120 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 SCN2BO60939 215 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 C1QCP02747 245 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 BPGMP07738 259 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 LYNX1P0DP58 116 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 CD52P31358 61 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 RPL27AP46776 148 aaKnown RBP0.61□□□□□ -2.31
YBX3-214ENST00000544501 CLDN12P56749 244 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 TMEM258P61165 79 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 HOXC5Q00444 222 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 GNA12Q03113 381 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 EBPQ15125 230 aaKnown RBP0.61□□□□□ -2.31
YBX3-214ENST00000544501 DEFB109BQ30KR1 87 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 ZNF791Q3KP31 576 aaPredicted RBP0.61□□□□□ -2.31
YBX3-214ENST00000544501 KRTAP20-1Q3LI63 56 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 DNAL1Q4LDG9 190 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 DRAM2Q6UX65 266 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 BAP18Q8IXM2 172 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 OR5L1Q8NGL2 311 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 RPS4Y2Q8TD47 263 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 Q8WTZ3 238 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 ASB17Q8WXJ9 295 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 RBP7Q96R05 134 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 NMNAT3Q96T66 252 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 PARVAQ9NVD7 372 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 MED29Q9NX70 200 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 DSCAML1Q8TD84 2053 aa0.61□□□□□ -2.31
YBX3-214ENST00000544501 ROCK2O75116 1388 aaKnown RBP0.6□□□□□ -2.31
YBX3-214ENST00000544501 DNAH8Q96JB1 4490 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 HMCN1Q96RW7 5635 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 LINC00854A0A1B0GVQ3 168 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 FTCDNL1E5RQL4 147 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 CCRL2O00421 344 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 STX10O60499 249 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 NEMFO60524 1076 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 MT-CO2P00403 227 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 NPPAP01160 153 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 ATP5G1P05496 136 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 SMIM10L2AP0DMW4 78 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 SMIM10L2BP0DMW5 78 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 CXCL3P19876 107 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 MIPP30301 263 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 CD79BP40259 229 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 GABRA2P47869 451 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 FABP5Q01469 135 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 SLC38A11Q08AI6 406 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 EIF3IQ13347 325 aaKnown RBP0.6□□□□□ -2.31
YBX3-214ENST00000544501 LGALS9BQ3B8N2 356 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 SAPCD1Q5SSQ6 148 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 LELP1Q5T871 98 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 MYO7BQ6PIF6 2116 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 LYZL1Q6UWQ5 148 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 SPATA12Q7Z6I5 190 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 LRRC28Q86X40 367 aaPredicted RBP0.6□□□□□ -2.31
YBX3-214ENST00000544501 FUNDC1Q8IVP5 155 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 LRRC34Q8IZ02 419 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 RIBC1Q8N443 379 aaPredicted RBP0.6□□□□□ -2.31
YBX3-214ENST00000544501 LFNGQ8NES3 379 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 OR10D3Q8NH80 312 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 DNAJB3Q8WWF6 145 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 CYGBQ8WWM9 190 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 PPCDCQ96CD2 204 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 TCEAL4Q96EI5 215 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 MROQ9BYG7 248 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 CFAP45Q9UL16 551 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 HDGFL3Q9Y3E1 203 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 FREM1Q5H8C1 2179 aa0.6□□□□□ -2.31
YBX3-214ENST00000544501 DSTQ03001 7570 aaKnown RBP0.59□□□□□ -2.31
YBX3-214ENST00000544501 DNAJC13O75165 2243 aa0.59□□□□□ -2.31
YBX3-214ENST00000544501 A0A087WUU8 490 aa0.59□□□□□ -2.31
YBX3-214ENST00000544501 IGKV1D-43A0A0B4J1Z2 117 aa0.59□□□□□ -2.31
YBX3-214ENST00000544501 TEX50A0A1B0GTY4 177 aa0.59□□□□□ -2.31
YBX3-214ENST00000544501 A0A1B0GW54 56 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms