RNA–Protein interactions for RNA: ENST00000544131.1

CCDC170-203, Transcript of coiled-coil domain containing 170, humanhuman

TSL 4

Gene CCDC170, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-203ENST00000544131 BORCS7Q96B45 105 aa0.77□□□□□ -2.29
CCDC170-203ENST00000544131 ZC2HC1AQ96GY0 325 aa0.77□□□□□ -2.29
CCDC170-203ENST00000544131 NAA38Q9BRA0 125 aaKnown RBP0.77□□□□□ -2.29
CCDC170-203ENST00000544131 GINS4Q9BRT9 223 aa0.77□□□□□ -2.29
CCDC170-203ENST00000544131 VCX3BQ9H321 246 aa0.77□□□□□ -2.29
CCDC170-203ENST00000544131 NMNAT1Q9HAN9 279 aaPredicted RBP0.77□□□□□ -2.29
CCDC170-203ENST00000544131 RSL24D1Q9UHA3 163 aaKnown RBP0.77□□□□□ -2.29
CCDC170-203ENST00000544131 TIMM9Q9Y5J7 89 aa0.77□□□□□ -2.29
CCDC170-203ENST00000544131 ARL5AQ9Y689 179 aa0.77□□□□□ -2.29
CCDC170-203ENST00000544131 ZNF532Q9HCE3 1301 aa0.77□□□□□ -2.29
CCDC170-203ENST00000544131 BLMP54132 1417 aaPredicted RBP0.77□□□□□ -2.29
CCDC170-203ENST00000544131 TEX14Q8IWB6 1497 aa0.77□□□□□ -2.29
CCDC170-203ENST00000544131 MYO18AQ92614 2054 aaKnown RBP0.77□□□□□ -2.29
CCDC170-203ENST00000544131 ZNF462Q96JM2 2506 aa0.77□□□□□ -2.29
CCDC170-203ENST00000544131 GPR98Q8WXG9 6306 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 MYH13Q9UKX3 1938 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 SBF1O95248 1867 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 RIMS1Q86UR5 1692 aaKnown RBP0.76□□□□□ -2.29
CCDC170-203ENST00000544131 NWD1Q149M9 1564 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 TOPBP1Q92547 1522 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 NUP160Q12769 1436 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 IGKV1D-42A0A075B6H8 117 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 TRAV7A0A075B6U4 112 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 IGHV1-18A0A0C4DH31 117 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 TRAPPC13A5PLN9 417 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 SLC22A1O15245 554 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 ORC5O43913 435 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 OR2J2O76002 312 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 ATG12O94817 140 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 ANGP03950 147 aaKnown RBP0.76□□□□□ -2.29
CCDC170-203ENST00000544131 C8GP07360 202 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 RBP1P09455 135 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 TRGC1P0CF51 173 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 SPI1P17947 270 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 GLRXP35754 106 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 NCALDP61601 193 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 POLR2GP62487 172 aaKnown RBP eCLIP0.76□□□□□ -2.29
CCDC170-203ENST00000544131 HIST1H3AP68431 136 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 H3F3AP84243 136 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 C9orf64Q5T6V5 341 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 TEX36Q5VZQ5 186 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 RPL22L1Q6P5R6 122 aaKnown RBP0.76□□□□□ -2.29
CCDC170-203ENST00000544131 SLC36A1Q7Z2H8 476 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 LYG2Q86SG7 212 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 KTN1-AS1Q86SY8 53 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 OOSP2Q86WS3 158 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 STX12Q86Y82 276 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 C12orf45Q8N5I9 185 aaPredicted RBP0.76□□□□□ -2.29
CCDC170-203ENST00000544131 OR11H6Q8NGC7 330 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 TERB2Q8NHR7 220 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 TOMM6Q96B49 74 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 TRABDQ9H4I3 376 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 SLC39A9Q9NUM3 307 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 IL20Q9NYY1 176 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 ERGIC3Q9Y282 383 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 UFC1Q9Y3C8 167 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 ABCA2Q9BZC7 2435 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 SPTBP11277 2137 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 FANCMQ8IYD8 2048 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 MCM3APO60318 1980 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 EML5Q05BV3 1969 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 MYH6P13533 1939 aa0.76□□□□□ -2.29
CCDC170-203ENST00000544131 CDK5RAP2Q96SN8 1893 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 ARHGEF28Q8N1W1 1705 aaKnown RBP0.75□□□□□ -2.29
CCDC170-203ENST00000544131 PIK3C2AO00443 1686 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 PREX1Q8TCU6 1659 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 KIF21BO75037 1637 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 SYNJ1O43426 1573 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 DIP2BQ9P265 1576 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 CPS1P31327 1500 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 CLASP1Q7Z460 1538 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 NUP155O75694 1391 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 POLEQ07864 2286 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 CEP350Q5VT06 3117 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 IGKV1-9A0A0C4DH69 117 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 HMSDA8MTL9 139 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 E5RI56 91 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 CYB5BO43169 146 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 MFSD11O43934 449 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 ZNF737O75373 536 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 UBBP0CG47 229 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 FKBP2P26885 142 aaKnown RBP0.75□□□□□ -2.29
CCDC170-203ENST00000544131 CASP1P29466 404 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 PIGPP57054 158 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 B2MP61769 119 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 GNG3P63215 75 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 AKR1C1Q04828 323 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 TRIQKQ629K1 86 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 Q6Q795 121 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 LCN15Q6UWW0 184 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 LCA10Q71F78 164 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 RPP25LQ8N5L8 163 aaKnown RBP0.75□□□□□ -2.29
CCDC170-203ENST00000544131 WFDC11Q8NEX6 87 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 OR5A1Q8NGJ0 315 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 OR8D4Q8NGM9 314 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 OR13C6PQ8NH95 151 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 GNPDA2Q8TDQ7 276 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 SLC7A6Q92536 515 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 TMEM106AQ96A25 262 aa0.75□□□□□ -2.29
CCDC170-203ENST00000544131 PRRT1Q99946 306 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms