RNA–Protein interactions for RNA: ENST00000543455.1

TMED3-204, Transcript of transmembrane p24 trafficking protein 3, humanhuman

TSL 2

Gene TMED3, Length 1,483 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-204ENST00000543455 A0A1B0GU03 582 aa13.9□□□□□ -0.18
TMED3-204ENST00000543455 ZNF207O43670 478 aaKnown RBP13.9□□□□□ -0.18
TMED3-204ENST00000543455 IL15RAQ13261 267 aa13.9□□□□□ -0.18
TMED3-204ENST00000543455 CASC10Q5T4H9 136 aa13.9□□□□□ -0.18
TMED3-204ENST00000543455 TCTE3Q8IZS6 198 aa13.9□□□□□ -0.18
TMED3-204ENST00000543455 NMES1Q9C002 83 aa13.9□□□□□ -0.18
TMED3-204ENST00000543455 SACSQ9NZJ4 4579 aa13.9□□□□□ -0.18
TMED3-204ENST00000543455 TRAV25A0A0B4J276 109 aa13.89□□□□□ -0.19
TMED3-204ENST00000543455 ZBTB8BQ8NAP8 495 aaPredicted RBP13.89□□□□□ -0.19
TMED3-204ENST00000543455 LYSTQ99698 3801 aa13.89□□□□□ -0.19
TMED3-204ENST00000543455 RNASE2P10153 161 aaKnown RBP13.88□□□□□ -0.19
TMED3-204ENST00000543455 MFAP4P55083 255 aa13.88□□□□□ -0.19
TMED3-204ENST00000543455 ERHP84090 104 aaKnown RBP13.88□□□□□ -0.19
TMED3-204ENST00000543455 SMCO1Q147U7 214 aa13.88□□□□□ -0.19
TMED3-204ENST00000543455 AARDQ4LEZ3 155 aa13.88□□□□□ -0.19
TMED3-204ENST00000543455 C20orf24Q9BUV8 137 aa13.88□□□□□ -0.19
TMED3-204ENST00000543455 K7EMT4 169 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 PITX3O75364 302 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 SLC16A13Q7RTY0 426 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 OR4D5Q8NGN0 318 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 OR2T35Q8NGX2 323 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 PINX1Q96BK5 328 aaKnown RBP13.87□□□□□ -0.19
TMED3-204ENST00000543455 TXN2Q99757 166 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 FAM110AQ9BQ89 295 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 GSKIPQ9P0R6 139 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 CACNG5Q9UF02 275 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 RYR2Q92736 4967 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 TSPAN4O14817 238 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 IFNA17P01571 189 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 BSXQ3C1V8 233 aa13.87□□□□□ -0.19
TMED3-204ENST00000543455 RBPMS2Q6ZRY4 209 aaKnown RBP13.87□□□□□ -0.19
TMED3-204ENST00000543455 MRPL36Q9P0J6 103 aaKnown RBP13.87□□□□□ -0.19
TMED3-204ENST00000543455 C15orf62A8K5M9 175 aa13.86□□□□□ -0.19
TMED3-204ENST00000543455 PPP1R1CQ8WVI7 109 aa13.86□□□□□ -0.19
TMED3-204ENST00000543455 SPAG8Q99932 426 aaPredicted RBP13.86□□□□□ -0.19
TMED3-204ENST00000543455 FNDC4Q9H6D8 234 aaPredicted RBP13.86□□□□□ -0.19
TMED3-204ENST00000543455 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.86□□□□□ -0.19
TMED3-204ENST00000543455 SMPXQ9UHP9 88 aa13.86□□□□□ -0.19
TMED3-204ENST00000543455 TENM2Q9NT68 2774 aa13.85□□□□□ -0.19
TMED3-204ENST00000543455 G3V3Q6 166 aa13.85□□□□□ -0.19
TMED3-204ENST00000543455 NUPL2O15504 423 aaKnown RBP13.85□□□□□ -0.19
TMED3-204ENST00000543455 HOXA1P49639 335 aaPredicted RBP13.85□□□□□ -0.19
TMED3-204ENST00000543455 ODF3L2Q3SX64 289 aa13.85□□□□□ -0.19
TMED3-204ENST00000543455 Q5BKY6 102 aa13.85□□□□□ -0.19
TMED3-204ENST00000543455 OR1S1Q8NH92 325 aa13.85□□□□□ -0.19
TMED3-204ENST00000543455 GAR1Q9NY12 217 aaKnown RBP13.85□□□□□ -0.19
TMED3-204ENST00000543455 IGHV7-4-1A0A0J9YVY3 117 aa13.84□□□□□ -0.19
TMED3-204ENST00000543455 SMLR1H3BR10 107 aa13.84□□□□□ -0.19
TMED3-204ENST00000543455 CHEK1O14757 476 aa13.84□□□□□ -0.19
TMED3-204ENST00000543455 SNCAP37840 140 aa13.84□□□□□ -0.19
TMED3-204ENST00000543455 ID3Q02535 119 aa13.84□□□□□ -0.19
TMED3-204ENST00000543455 RELQ04864 619 aaPredicted RBP13.84□□□□□ -0.19
TMED3-204ENST00000543455 FGL1Q08830 312 aa13.84□□□□□ -0.19
TMED3-204ENST00000543455 MLANAQ16655 118 aa13.84□□□□□ -0.19
TMED3-204ENST00000543455 RNF2Q99496 336 aa13.84□□□□□ -0.19
TMED3-204ENST00000543455 UBQLN2Q9UHD9 624 aa13.84□□□□□ -0.19
TMED3-204ENST00000543455 IGHV3-49A0A0A0MS15 119 aa13.83□□□□□ -0.2
TMED3-204ENST00000543455 GNG7O60262 68 aa13.83□□□□□ -0.2
TMED3-204ENST00000543455 MPC2O95563 127 aa13.83□□□□□ -0.2
TMED3-204ENST00000543455 MBPP02686 304 aaPredicted RBP13.83□□□□□ -0.2
TMED3-204ENST00000543455 C1QBP02746 253 aa13.83□□□□□ -0.2
TMED3-204ENST00000543455 LYL1P12980 280 aa13.83□□□□□ -0.2
TMED3-204ENST00000543455 NKX2-1P43699 371 aaPredicted RBP13.83□□□□□ -0.2
TMED3-204ENST00000543455 RAB32Q13637 225 aa13.83□□□□□ -0.2
TMED3-204ENST00000543455 OR52E5Q8NH55 327 aa13.83□□□□□ -0.2
TMED3-204ENST00000543455 ZFAND3Q9H8U3 227 aa13.83□□□□□ -0.2
TMED3-204ENST00000543455 TRAV14DV4A0A0A6YYC5 116 aa13.82□□□□□ -0.2
TMED3-204ENST00000543455 FAM90A26D6RGX4 464 aa13.82□□□□□ -0.2
TMED3-204ENST00000543455 SPCS3P61009 180 aa13.82□□□□□ -0.2
TMED3-204ENST00000543455 LRRC37A5PQ49AS3 106 aa13.82□□□□□ -0.2
TMED3-204ENST00000543455 ZFAND6Q6FIF0 208 aa13.82□□□□□ -0.2
TMED3-204ENST00000543455 TOMM20LQ6UXN7 152 aa13.82□□□□□ -0.2
TMED3-204ENST00000543455 TMEM170AQ8WVE7 144 aa13.82□□□□□ -0.2
TMED3-204ENST00000543455 RHPN1-AS1Q9BWJ2 59 aa13.82□□□□□ -0.2
TMED3-204ENST00000543455 CACFD1Q9UGQ2 172 aa13.82□□□□□ -0.2
TMED3-204ENST00000543455 YIF1AO95070 293 aa13.81□□□□□ -0.2
TMED3-204ENST00000543455 TMEM50AO95807 157 aa13.81□□□□□ -0.2
TMED3-204ENST00000543455 SCGB1D2O95969 90 aa13.81□□□□□ -0.2
TMED3-204ENST00000543455 ZFP69Q49AA0 526 aa13.81□□□□□ -0.2
TMED3-204ENST00000543455 FAM90A2PQ658T7 463 aa13.81□□□□□ -0.2
TMED3-204ENST00000543455 LILRB2Q8N423 598 aa13.81□□□□□ -0.2
TMED3-204ENST00000543455 TMEM116Q8NCL8 245 aa13.81□□□□□ -0.2
TMED3-204ENST00000543455 GGTLC1Q9BX51 225 aa13.81□□□□□ -0.2
TMED3-204ENST00000543455 HSPB7Q9UBY9 170 aa13.81□□□□□ -0.2
TMED3-204ENST00000543455 IGHV3OR16-13A0A075B7E8 117 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 IGHV3-74A0A0B4J1X5 117 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 K7EPK0 472 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 APOHP02749 345 aaPredicted RBP13.8□□□□□ -0.2
TMED3-204ENST00000543455 PET100P0DJ07 73 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 NPBWR1P48145 328 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 S100A10P60903 97 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 LAMTOR1Q6IAA8 161 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 RNF126Q9BV68 326 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 PUS1Q9Y606 427 aaKnown RBP eCLIP13.8□□□□□ -0.2
TMED3-204ENST00000543455 LOC102724200A0A096LPH7 203 aaPredicted RBP13.8□□□□□ -0.2
TMED3-204ENST00000543455 H0YIZ8 118 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 BOLA2-SMG1P6H3BVE0 249 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 CORTO00230 105 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 SLC25A4P12235 298 aa13.8□□□□□ -0.2
TMED3-204ENST00000543455 SUB1P53999 127 aaKnown RBP eCLIP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms