RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 SHPKQ9UHJ6 478 aa7.31□□□□□ -1.24
TNFRSF1A-214ENST00000543048 PIGBOS1A0A0B4J2F0 54 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 C15orf62A8K5M9 175 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 ZNF207O43670 478 aaKnown RBP7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 GNG7O60262 68 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 PFDN1O60925 122 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 YIF1AO95070 293 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 SCAF4O95104 1147 aaKnown RBP7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 TMEM50AO95807 157 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 RNASE2P10153 161 aaKnown RBP7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 HTR2BP41595 481 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 HOXA1P49639 335 aaPredicted RBP7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 FCN2Q15485 313 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 BTNL8Q6UX41 500 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 LINC00322Q6ZN03 302 aaPredicted RBP7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 DEFB125Q8N687 156 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 HEYLQ9NQ87 328 aaPredicted RBP7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 MGAT4CQ9UBM8 478 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 CACNG5Q9UF02 275 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 SMPXQ9UHP9 88 aa7.3□□□□□ -1.24
TNFRSF1A-214ENST00000543048 IGHV3OR16-8A0A075B7F1 116 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 CEBPZOSA8MTT3 80 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 GOSR2O14653 212 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 TSPAN4O14817 238 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 MLANAQ16655 118 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 BSXQ3C1V8 233 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 LGI3Q8N145 548 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 LRTM2Q8N967 370 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 TMEM116Q8NCL8 245 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 OR11H7Q8NGC8 314 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 OR10C1Q96KK4 312 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 SPATA25Q9BR10 227 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 SRD5A3Q9H8P0 318 aa7.29□□□□□ -1.24
TNFRSF1A-214ENST00000543048 TRAV14DV4A0A0A6YYC5 116 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 IGHV7-4-1A0A0J9YVY3 117 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 DUXBA0A1W2PPF3 345 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 RBMY1BA6NDE4 496 aaKnown RBP7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 RBMY1EA6NEQ0 496 aaKnown RBP7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 C3orf84H3BNL1 204 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 CHEK1O14757 476 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 CCNKO75909 580 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 RBMY1DP0C7P1 496 aaKnown RBP7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 CXCL3P19876 107 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 C2orf83Q53S99 150 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 TOMM20LQ6UXN7 152 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 LYZL2Q7Z4W2 148 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 NOXA1Q86UR1 476 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 ASB13Q8WXK3 278 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 ZNF414Q96IQ9 312 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 SPAG8Q99932 426 aaPredicted RBP7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 RHPN1-AS1Q9BWJ2 59 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 HIPK2Q9H2X6 1198 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 PRR13Q9NZ81 148 aa7.28□□□□□ -1.24
TNFRSF1A-214ENST00000543048 TRAV30A0A087WSZ9 112 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 A0A1B0GU03 582 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 RPS10-NUDT3A0A1W2PQS6 291 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 CLN5O75503 358 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 IFNA21P01568 189 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 GIPP09681 153 aaPredicted RBP7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 OPRK1P41145 380 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 CMC4P56277 68 aaPredicted RBP7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 SMCO1Q147U7 214 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 NMSQ5H8A3 153 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 ZNF600Q6ZNG1 722 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 OR4X1Q8NH49 305 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 RNASEH2CQ8TDP1 164 aaKnown RBP7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 GINS3Q9BRX5 216 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 WFDC10AQ9H1F0 79 aa7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 FNDC4Q9H6D8 234 aaPredicted RBP7.27□□□□□ -1.25
TNFRSF1A-214ENST00000543048 CCSO14618 274 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 SCGB2A1O75556 95 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 ADAP1O75689 374 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 CD5P06127 495 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 SLC25A4P12235 298 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 BMI1P35226 326 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 H2BFSP57053 126 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 RAP2BP61225 183 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 TNFRSF9Q07011 255 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 XP32Q5T750 250 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 ETFRF1Q6IPR1 90 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 GSG1LQ6UXU4 331 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 TCTE3Q8IZS6 198 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 PPP1R14BQ96C90 147 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 ST6GAL2Q96JF0 529 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 RNF2Q99496 336 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 RBKSQ9H477 322 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 MRPL36Q9P0J6 103 aaKnown RBP7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 HSPB7Q9UBY9 170 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 TMED3Q9Y3Q3 217 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 PUS1Q9Y606 427 aaKnown RBP eCLIP7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 U3KQ87 197 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 AGRNO00468 2067 aa7.26□□□□□ -1.25
TNFRSF1A-214ENST00000543048 CSMD3Q7Z407 3707 aa7.25□□□□□ -1.25
TNFRSF1A-214ENST00000543048 LOC102724200A0A096LPH7 203 aaPredicted RBP7.25□□□□□ -1.25
TNFRSF1A-214ENST00000543048 IGHV3-49A0A0A0MS15 119 aa7.25□□□□□ -1.25
TNFRSF1A-214ENST00000543048 C5orf51A6NDU8 294 aa7.25□□□□□ -1.25
TNFRSF1A-214ENST00000543048 OR4C46A6NHA9 309 aa7.25□□□□□ -1.25
TNFRSF1A-214ENST00000543048 FAM25EA8MYX2 175 aa7.25□□□□□ -1.25
TNFRSF1A-214ENST00000543048 NXPH3O95157 252 aa7.25□□□□□ -1.25
TNFRSF1A-214ENST00000543048 SIX6O95475 246 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms