RNA–Protein interactions for RNA: ENST00000542845.3

LIMS1-214, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-214ENST00000542845 DCANP1Q8TF63 244 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 TMEM230Q96A57 120 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 GNPNAT1Q96EK6 184 aaPredicted RBP3.27□□□□□ -1.89
LIMS1-214ENST00000542845 C20orf173Q96LM9 149 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 LINC00052Q96N35 136 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 HSD17B10Q99714 261 aaKnown RBP3.27□□□□□ -1.89
LIMS1-214ENST00000542845 CABLES2Q9BTV7 478 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 GABARAPL3Q9BY60 117 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 SLC35B3Q9H1N7 401 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 PLGRKTQ9HBL7 147 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 BET1LQ9NYM9 111 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 KCNK7Q9Y2U2 307 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 NSG2Q9Y328 171 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 ORC6Q9Y5N6 252 aa3.27□□□□□ -1.89
LIMS1-214ENST00000542845 IGKV1D-8A0A087WSZ0 117 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 TRAV26-1A0A087WT03 109 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 IGKV1D-13A0A0B4J2D9 117 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 A0A1B0GU03 582 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 TCRBV3S1A0A5B6 114 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 SULT1C2O00338 296 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 IGKV1-13P0DP09 117 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 HTN1P15515 57 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 NQO2P16083 231 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 EIF2B2P49770 351 aaKnown RBP3.26□□□□□ -1.89
LIMS1-214ENST00000542845 QRFPP83859 136 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 ST3GAL4Q11206 333 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 CTF1Q16619 201 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 C1orf100Q5SVJ3 147 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 OGFRL1Q5TC84 451 aaPredicted RBP3.26□□□□□ -1.89
LIMS1-214ENST00000542845 IGFL4Q6B9Z1 124 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 ZNF600Q6ZNG1 722 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 TPRA1Q86W33 373 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 C1orf158Q8N1D5 194 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 ZNF114Q8NC26 417 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 OR56B1Q8NGI3 324 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 OR4C16Q8NGL9 310 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 OR1L8Q8NGR8 309 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 SECTM1Q8WVN6 248 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 LSM10Q969L4 123 aaKnown RBP3.26□□□□□ -1.89
LIMS1-214ENST00000542845 PGLYRP3Q96LB9 341 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 METTL26Q96S19 204 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 ATP6V0BQ99437 205 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 TXN2Q99757 166 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 TMEM70Q9BUB7 260 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 GABARAPL1Q9H0R8 117 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 CCL28Q9NRJ3 127 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 FAM212BQ9NTI7 297 aaPredicted RBP3.26□□□□□ -1.89
LIMS1-214ENST00000542845 CLEC2DQ9UHP7 191 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 OR2W1Q9Y3N9 320 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 OR51B2Q9Y5P1 312 aa3.26□□□□□ -1.89
LIMS1-214ENST00000542845 LYRM9A8MSI8 78 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 FAM90A26D6RGX4 464 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 I3L2K1 104 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 SIVA1O15304 175 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 DENRO43583 198 aaKnown RBP3.25□□□□□ -1.89
LIMS1-214ENST00000542845 SNAPC5O75971 98 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 SLC22A5O76082 557 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 TMEM50AO95807 157 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 IGLV2-14P01704 120 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 HLA-DQB1P01920 261 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 CDK1P06493 297 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 HLA-DRB4P13762 266 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 MYL12AP19105 171 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 AZU1P20160 251 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 MAPK3P27361 379 aaPredicted RBP3.25□□□□□ -1.89
LIMS1-214ENST00000542845 NPBWR1P48145 328 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 ALDH3B2P48448 385 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 RASSF2P50749 326 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 AP2S1P53680 142 aaPredicted RBP3.25□□□□□ -1.89
LIMS1-214ENST00000542845 CLDN12P56749 244 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 TAS2R31P59538 309 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 UBE2V1Q13404 147 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 C2orf76Q3KRA6 126 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 ACSM3Q53FZ2 586 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 PIK3CD-AS1Q5SR53 167 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 HSD17B13Q7Z5P4 300 aaPredicted RBP3.25□□□□□ -1.89
LIMS1-214ENST00000542845 FAM89BQ8N5H3 189 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 PRSS3P2Q8NHM4 247 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 RAB3CQ96E17 227 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 TMEM56Q96MV1 263 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 SLC5A7Q9GZV3 580 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 DCSTAMPQ9H295 470 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 NDUFA4L2Q9NRX3 87 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 MSRB1Q9NZV6 116 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 ELF5Q9UKW6 265 aaPredicted RBP3.25□□□□□ -1.89
LIMS1-214ENST00000542845 POMPQ9Y244 141 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 MRPS16Q9Y3D3 137 aaKnown RBP3.25□□□□□ -1.89
LIMS1-214ENST00000542845 AP4S1Q9Y587 144 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 HLA-DRB4X5D2U9 266 aa3.25□□□□□ -1.89
LIMS1-214ENST00000542845 LRP1Q07954 4544 aaKnown RBP3.25□□□□□ -1.89
LIMS1-214ENST00000542845 FOXI3A8MTJ6 420 aaPredicted RBP3.24□□□□□ -1.89
LIMS1-214ENST00000542845 F6UB75 175 aa3.24□□□□□ -1.89
LIMS1-214ENST00000542845 PSCAO43653 123 aa3.24□□□□□ -1.89
LIMS1-214ENST00000542845 GAS8-AS1O95177 125 aa3.24□□□□□ -1.89
LIMS1-214ENST00000542845 HPRT1P00492 218 aa3.24□□□□□ -1.89
LIMS1-214ENST00000542845 KRASP01116 189 aa3.24□□□□□ -1.89
LIMS1-214ENST00000542845 RLN1P04808 185 aa3.24□□□□□ -1.89
LIMS1-214ENST00000542845 CALB2P22676 271 aa3.24□□□□□ -1.89
LIMS1-214ENST00000542845 GADD45AP24522 165 aa3.24□□□□□ -1.89
LIMS1-214ENST00000542845 CRYBB3P26998 211 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms