RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 SNRPEP62304 92 aaKnown RBP11.21□□□□□ -0.61
LDB3-207ENST00000542786 OR5AU1Q8NGC0 362 aa11.21□□□□□ -0.61
LDB3-207ENST00000542786 UHRF2Q96PU4 802 aa11.21□□□□□ -0.61
LDB3-207ENST00000542786 GSX1Q9H4S2 264 aaPredicted RBP11.21□□□□□ -0.61
LDB3-207ENST00000542786 ABCA2Q9BZC7 2435 aa11.21□□□□□ -0.62
LDB3-207ENST00000542786 VWC2LB2RUY7 222 aa11.21□□□□□ -0.62
LDB3-207ENST00000542786 OCC1Q8TAD7 63 aa11.21□□□□□ -0.62
LDB3-207ENST00000542786 FXYD5Q96DB9 178 aa11.21□□□□□ -0.62
LDB3-207ENST00000542786 AURKAIP1Q9NWT8 199 aaPredicted RBP11.21□□□□□ -0.62
LDB3-207ENST00000542786 LY96Q9Y6Y9 160 aa11.21□□□□□ -0.62
LDB3-207ENST00000542786 AKAP6Q13023 2319 aa11.21□□□□□ -0.62
LDB3-207ENST00000542786 TACC2O95359 2948 aa11.2□□□□□ -0.62
LDB3-207ENST00000542786 ELOA3CA0A087WX78 387 aaPredicted RBP11.2□□□□□ -0.62
LDB3-207ENST00000542786 K7EN84 100 aa11.2□□□□□ -0.62
LDB3-207ENST00000542786 GGCTO75223 188 aaKnown RBP11.2□□□□□ -0.62
LDB3-207ENST00000542786 CNIH1O95406 144 aa11.2□□□□□ -0.62
LDB3-207ENST00000542786 IGKV1-17P01599 117 aa11.2□□□□□ -0.62
LDB3-207ENST00000542786 PYYP10082 97 aa11.2□□□□□ -0.62
LDB3-207ENST00000542786 RPL35P42766 123 aaKnown RBP11.2□□□□□ -0.62
LDB3-207ENST00000542786 GALR1P47211 349 aa11.2□□□□□ -0.62
LDB3-207ENST00000542786 UBE2L3P68036 154 aaKnown RBP11.2□□□□□ -0.62
LDB3-207ENST00000542786 CX3CL1P78423 397 aa11.2□□□□□ -0.62
LDB3-207ENST00000542786 ZNF562Q6V9R5 426 aa11.2□□□□□ -0.62
LDB3-207ENST00000542786 C22orf15Q8WYQ4 148 aa11.2□□□□□ -0.62
LDB3-207ENST00000542786 BBC3Q96PG8 261 aaPredicted RBP11.2□□□□□ -0.62
LDB3-207ENST00000542786 SPOCK3Q9BQ16 436 aa11.2□□□□□ -0.62
LDB3-207ENST00000542786 MED13LQ71F56 2210 aa11.2□□□□□ -0.62
LDB3-207ENST00000542786 NPIPB5A8MRT5 1133 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 SRP14P37108 136 aaKnown RBP11.19□□□□□ -0.62
LDB3-207ENST00000542786 MYCNOSP40205 109 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 HES1Q14469 280 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 C10orf105Q8TEF2 133 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 FAM103A1Q9BTL3 118 aaKnown RBP11.19□□□□□ -0.62
LDB3-207ENST00000542786 TGOLN2O43493 480 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 TSPAN9O75954 239 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 EGR2P11161 476 aaPredicted RBP11.19□□□□□ -0.62
LDB3-207ENST00000542786 CRYBB3P26998 211 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 SAA4P35542 130 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 PAX8Q06710 450 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 FAM120AOSQ5T036 256 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 TEX38Q6PEX7 206 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 LINC00305Q7Z4B0 112 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 LINC00518Q8N0U6 118 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 FANCD2OSQ96PS1 177 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 PAXXQ9BUH6 204 aa11.19□□□□□ -0.62
LDB3-207ENST00000542786 FLNCQ14315 2725 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 IGLV11-55A0A075B6I3 123 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 IGHV4-61A0A0C4DH41 118 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 AP4M1O00189 453 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 TRGC2P03986 189 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 PIP4P2Q8N4L2 257 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 Q8N9W7 124 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 NECAP1Q8NC96 275 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 OR1L6Q8NGR2 347 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 ARPC1AQ92747 370 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 PERPQ96FX8 193 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 SFRP2Q96HF1 295 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 CCL19Q99731 98 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 OR51M1Q9H341 326 aa11.18□□□□□ -0.62
LDB3-207ENST00000542786 HIST1H2BKO60814 126 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 HYPMO75409 117 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 TYMSP04818 313 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 HIST1H2BJP06899 126 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 PSG1P11464 419 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 GP9P14770 177 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 HIST1H2BOP23527 126 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 HIST1H2BBP33778 126 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 HIST1H2BDP58876 126 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 HIST1H2BCP62807 126 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 HIST2H2BEQ16778 126 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 TIGITQ495A1 244 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.17□□□□□ -0.62
LDB3-207ENST00000542786 TTC9CQ8N5M4 171 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 OR5T1Q8NG75 326 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 OR1B1Q8NGR6 318 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 HIST1H2BHQ93079 126 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 IGF2BP2-AS1Q96M15 143 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 IMMP2LQ96T52 175 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 HIST1H2BNQ99877 126 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 HIST1H2BMQ99879 126 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 SRD5A3Q9H8P0 318 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 SPTAN1Q13813 2472 aaKnown RBP11.17□□□□□ -0.62
LDB3-207ENST00000542786 WNK2Q9Y3S1 2297 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 IGHV7-81A0A0B4J1V7 117 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 PPP1R2P9O14990 202 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 IGLV2-8P01709 118 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 PRB1P04280 392 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 TMEM11P17152 192 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 ORM2P19652 201 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 SUMO1P63165 101 aaKnown RBP11.17□□□□□ -0.62
LDB3-207ENST00000542786 CENPWQ5EE01 88 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 KLF17Q5JT82 389 aaPredicted RBP11.17□□□□□ -0.62
LDB3-207ENST00000542786 ZNF329Q86UD4 541 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 FRZBQ92765 325 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 OR5B12Q96R08 314 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 LPAR2Q9HBW0 351 aa11.17□□□□□ -0.62
LDB3-207ENST00000542786 CENPVL3A0A0U1RRI6 287 aa11.16□□□□□ -0.62
LDB3-207ENST00000542786 F8W735 103 aaPredicted RBP11.16□□□□□ -0.62
LDB3-207ENST00000542786 NPFFO15130 113 aa11.16□□□□□ -0.62
LDB3-207ENST00000542786 FABP9Q0Z7S8 132 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms