RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	LYRM1	O43325	122 aa		11.52	□□□□□ -0.57
ECHDC2-223	ENST00000542552	APOH	P02749	345 aa	Predicted RBP	11.52	□□□□□ -0.57
ECHDC2-223	ENST00000542552	ANXA7	P20073	488 aa	Known RBP	11.52	□□□□□ -0.57
ECHDC2-223	ENST00000542552	RND2	P52198	227 aa		11.52	□□□□□ -0.57
ECHDC2-223	ENST00000542552	ETFRF1	Q6IPR1	90 aa		11.52	□□□□□ -0.57
ECHDC2-223	ENST00000542552	LYG2	Q86SG7	212 aa		11.52	□□□□□ -0.57
ECHDC2-223	ENST00000542552	OR1S2	Q8NGQ3	325 aa		11.52	□□□□□ -0.57
ECHDC2-223	ENST00000542552	CSMD3	Q7Z407	3707 aa		11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	SCGB2A1	O75556	95 aa		11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	ADAP1	O75689	374 aa		11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	OR10J1	P30954	320 aa		11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	GPX4	P36969	197 aa	Predicted RBP	11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	YPEL3	P61236	119 aa	Predicted RBP	11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	ODF3L2	Q3SX64	289 aa		11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	LILRB2	Q8N423	598 aa		11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	ST8SIA2	Q92186	375 aa		11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	NPIPB3	Q92617	1050 aa		11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	FAM110A	Q9BQ89	295 aa		11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	SPATA25	Q9BR10	227 aa		11.51	□□□□□ -0.57
ECHDC2-223	ENST00000542552	IGHV3OR16-13	A0A075B7E8	117 aa		11.5	□□□□□ -0.57
ECHDC2-223	ENST00000542552	IGHV3-74	A0A0B4J1X5	117 aa		11.5	□□□□□ -0.57
ECHDC2-223	ENST00000542552	OR4C46	A6NHA9	309 aa		11.5	□□□□□ -0.57
ECHDC2-223	ENST00000542552	SYNGR2	O43760	224 aa		11.5	□□□□□ -0.57
ECHDC2-223	ENST00000542552	MED6	O75586	246 aa		11.5	□□□□□ -0.57
ECHDC2-223	ENST00000542552	CD5	P06127	495 aa		11.5	□□□□□ -0.57
ECHDC2-223	ENST00000542552	CRYBB3	P26998	211 aa		11.5	□□□□□ -0.57
ECHDC2-223	ENST00000542552	C4orf46	Q504U0	113 aa		11.5	□□□□□ -0.57
ECHDC2-223	ENST00000542552	COQ8A	Q8NI60	647 aa		11.5	□□□□□ -0.57
ECHDC2-223	ENST00000542552	S100Z	Q8WXG8	99 aa		11.5	□□□□□ -0.57
ECHDC2-223	ENST00000542552	CITED4	Q96RK1	184 aa		11.5	□□□□□ -0.57
ECHDC2-223	ENST00000542552	MPTX1	A8MV57	137 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	TCRB	P04435	133 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	IFNA4	P05014	189 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	IAPP	P10997	89 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	NPPC	P23582	126 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	BMI1	P35226	326 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	ID3	Q02535	119 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	MITD1	Q8WV92	249 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	ACY3	Q96HD9	319 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	CIB3	Q96Q77	187 aa	Predicted RBP	11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	MAGT1	Q9H0U3	335 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	C20orf85	Q9H1P6	137 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552		U3KQE9	123 aa		11.49	□□□□□ -0.57
ECHDC2-223	ENST00000542552	GAMT	Q14353	236 aa		11.48	□□□□□ -0.57
ECHDC2-223	ENST00000542552	TCF24	Q7RTU0	167 aa		11.48	□□□□□ -0.57
ECHDC2-223	ENST00000542552	OR4D5	Q8NGN0	318 aa		11.48	□□□□□ -0.57
ECHDC2-223	ENST00000542552		Q8WTZ3	238 aa		11.48	□□□□□ -0.57
ECHDC2-223	ENST00000542552	METTL26	Q96S19	204 aa		11.48	□□□□□ -0.57
ECHDC2-223	ENST00000542552	PTTG2	Q9NZH5	202 aa		11.48	□□□□□ -0.57
ECHDC2-223	ENST00000542552	IGKV1D-37	A0A075B6S9	117 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	IGHV3-66	A0A0C4DH42	116 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	PRSS46	E5RG02	174 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	DFFB	O76075	338 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	TOMM40	O96008	361 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	IFNA21	P01568	189 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	RAB11A	P62491	216 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	GGTLC1	Q9BX51	225 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	TMEM231	Q9H6L2	316 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	UBQLN2	Q9UHD9	624 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	TBC1D24	Q9ULP9	559 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	STARD9	Q9P2P6	4700 aa		11.47	□□□□□ -0.57
ECHDC2-223	ENST00000542552	LOC102724200	A0A096LPH7	203 aa	Predicted RBP	11.46	□□□□□ -0.57
ECHDC2-223	ENST00000542552	TRAV2	A0A0B4J234	112 aa		11.46	□□□□□ -0.57
ECHDC2-223	ENST00000542552		A0A1W2PS18	150 aa		11.46	□□□□□ -0.57
ECHDC2-223	ENST00000542552	WRB	O00258	174 aa		11.46	□□□□□ -0.57
ECHDC2-223	ENST00000542552	RD3L	P0DJH9	198 aa		11.46	□□□□□ -0.57
ECHDC2-223	ENST00000542552	MS4A6A	Q9H2W1	248 aa		11.46	□□□□□ -0.57
ECHDC2-223	ENST00000542552	EDA2R	Q9HAV5	297 aa		11.46	□□□□□ -0.57
ECHDC2-223	ENST00000542552	NUDT15	Q9NV35	164 aa		11.46	□□□□□ -0.57
ECHDC2-223	ENST00000542552	IGKV3-7	A0A075B6H7	116 aa		11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	TRAV6	A0A075B6T7	132 aa		11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	PSG1	P11464	419 aa		11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	CMC4	P56277	68 aa	Predicted RBP	11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	POLR2G	P62487	172 aa	Known RBP eCLIP	11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	PAFAH1B2	P68402	229 aa		11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	RPP30	P78346	268 aa	Known RBP	11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	ASAH1	Q13510	395 aa		11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	USF2	Q15853	346 aa	Predicted RBP	11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	GBGT1	Q8N5D6	347 aa		11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	SLC35E1	Q96K37	410 aa		11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	RETN	Q9HD89	108 aa		11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	BATF3	Q9NR55	127 aa		11.45	□□□□□ -0.58
ECHDC2-223	ENST00000542552	IGKV1OR2-108	A0A075B7D4	117 aa		11.44	□□□□□ -0.58
ECHDC2-223	ENST00000542552	IL4	P05112	153 aa		11.44	□□□□□ -0.58
ECHDC2-223	ENST00000542552	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.44	□□□□□ -0.58	4e-6	■□□□□ 8.4
ECHDC2-223	ENST00000542552	NKX2-1	P43699	371 aa	Predicted RBP	11.44	□□□□□ -0.58
ECHDC2-223	ENST00000542552	P2RY1	P47900	373 aa		11.44	□□□□□ -0.58
ECHDC2-223	ENST00000542552	TFPI2	P48307	235 aa		11.44	□□□□□ -0.58
ECHDC2-223	ENST00000542552	ZNF846	Q147U1	533 aa		11.44	□□□□□ -0.58
ECHDC2-223	ENST00000542552	IAH1	Q2TAA2	248 aa	Predicted RBP	11.44	□□□□□ -0.58
ECHDC2-223	ENST00000542552	C16orf54	Q6UWD8	224 aa		11.44	□□□□□ -0.58
ECHDC2-223	ENST00000542552	THAP8	Q8NA92	274 aa		11.44	□□□□□ -0.58
ECHDC2-223	ENST00000542552	WDR12	Q9GZL7	423 aa	Known RBP	11.44	□□□□□ -0.58
ECHDC2-223	ENST00000542552	MAP6D1	Q9H9H5	199 aa		11.44	□□□□□ -0.58
ECHDC2-223	ENST00000542552	DYNC2H1	Q8NCM8	4307 aa	Known RBP	11.43	□□□□□ -0.58
ECHDC2-223	ENST00000542552	FAM240B	A0A1B0GVZ2	78 aa		11.43	□□□□□ -0.58
ECHDC2-223	ENST00000542552	C3orf84	H3BNL1	204 aa		11.43	□□□□□ -0.58
ECHDC2-223	ENST00000542552	UPK1B	O75841	260 aa		11.43	□□□□□ -0.58
ECHDC2-223	ENST00000542552	H2AFB2	P0C5Z0	115 aa		11.43	□□□□□ -0.58
ECHDC2-223	ENST00000542552	PAX9	P55771	341 aa		11.43	□□□□□ -0.58

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