RNA–Protein interactions for RNA: ENST00000541304.5

CDKN3-206, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 2 BASIC

Gene CDKN3, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-206ENST00000541304 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 PXDC1Q5TGL8 231 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 ASPHD1Q5U4P2 390 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 SLC25A24Q6NUK1 477 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 SLC16A13Q7RTY0 426 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 TMEM144Q7Z5S9 345 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 KLHDC1Q8N7A1 406 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 UBAC2Q8NBM4 344 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 OR4X1Q8NH49 305 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 LINC01006Q8NI28 216 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 TMEM158Q8WZ71 300 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 GNPNAT1Q96EK6 184 aaPredicted RBP4.47□□□□□ -1.69
CDKN3-206ENST00000541304 PHYHIPLQ96FC7 376 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 BSCL2Q96G97 398 aaPredicted RBP4.47□□□□□ -1.69
CDKN3-206ENST00000541304 C16orf92Q96LL3 132 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 DUX5Q96PT3 197 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 OR4C12Q96R67 309 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 ARPC5LQ9BPX5 153 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 FAM103A1Q9BTL3 118 aaKnown RBP4.47□□□□□ -1.69
CDKN3-206ENST00000541304 ZNF355PQ9NSJ1 428 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 C21orf62Q9NYP8 219 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 PAIP2BQ9ULR5 123 aaKnown RBP4.47□□□□□ -1.69
CDKN3-206ENST00000541304 FBXO7Q9Y3I1 522 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 DMRT1Q9Y5R6 373 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 HIVEP1P15822 2718 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 ZANQ9Y493 2812 aa4.47□□□□□ -1.69
CDKN3-206ENST00000541304 CELSR1Q9NYQ6 3014 aa4.46□□□□□ -1.69
CDKN3-206ENST00000541304 NSD1Q96L73 2696 aaPredicted RBP4.46□□□□□ -1.7
CDKN3-206ENST00000541304 IGSF23A1L1A6 192 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 FAM24AA6NFZ4 105 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 PMS2P5A8MQ11 134 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 G3V318 75 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 I3L2K1 104 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 NUPL2O15504 423 aaKnown RBP4.46□□□□□ -1.7
CDKN3-206ENST00000541304 GNG7O60262 68 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 CLN5O75503 358 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 MT-CO2P00403 227 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 METTL15P1P0C7V9 234 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 PF4V1P10720 104 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 TPT1P13693 172 aaKnown RBP4.46□□□□□ -1.7
CDKN3-206ENST00000541304 MYOD1P15172 320 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 ZP3P21754 424 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 BMI1P35226 326 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 CDX1P47902 265 aaPredicted RBP4.46□□□□□ -1.7
CDKN3-206ENST00000541304 RAB9AP51151 201 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 RIPPLY3P57055 190 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 PROK1P58294 105 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 TPPP2P59282 170 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 SERF2P84101 59 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 AKR1C1Q04828 323 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 C15orf32Q32M92 178 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 SPINK9Q5DT21 86 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 OR8G2PQ6IF36 304 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 SLC51BQ86UW2 128 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 ZNF709Q8N972 641 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 OR5C1Q8NGR4 320 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 STOML3Q8TAV4 291 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 ZNF502Q8TBZ5 544 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 SCGB1C1Q8TD33 95 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 WIPF2Q8TF74 440 aaPredicted RBP4.46□□□□□ -1.7
CDKN3-206ENST00000541304 C4orf3Q8WVX3 66 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 TRGV9Q99603 122 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 PSMG3Q9BT73 122 aaPredicted RBP4.46□□□□□ -1.7
CDKN3-206ENST00000541304 C19orf24Q9BVV8 132 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 ARL6Q9H0F7 186 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 WDR83OSQ9Y284 106 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 TIMM9Q9Y5J7 89 aa4.46□□□□□ -1.7
CDKN3-206ENST00000541304 TSSC4Q9Y5U2 329 aaPredicted RBP4.46□□□□□ -1.7
CDKN3-206ENST00000541304 MAP1AP78559 2803 aaPredicted RBP4.46□□□□□ -1.7
CDKN3-206ENST00000541304 MED13LQ71F56 2210 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.45□□□□□ -1.7
CDKN3-206ENST00000541304 UMAD1C9J7I0 102 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 K7EIM0 57 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 CST7O76096 145 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 MBP02144 154 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 REG1AP05451 166 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 LGALS1P09382 135 aaKnown RBP4.45□□□□□ -1.7
CDKN3-206ENST00000541304 EIF2B2P49770 351 aaKnown RBP4.45□□□□□ -1.7
CDKN3-206ENST00000541304 RAB5CP51148 216 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 YPEL3P61236 119 aaPredicted RBP4.45□□□□□ -1.7
CDKN3-206ENST00000541304 ZNF343Q6P1L6 599 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 ACSM6Q6P461 480 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 ZNF575Q86XF7 245 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 NDUFA11Q86Y39 141 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 C9orf62Q8N4C0 152 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 TMEM217Q8N7C4 229 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 THAP8Q8NA92 274 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 OR5T1Q8NG75 326 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 OR5AU1Q8NGC0 362 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 SCARB1Q8WTV0 552 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 TMEM170AQ8WVE7 144 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 TMEM190Q8WZ59 177 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 NOL4LQ96MY1 436 aaPredicted RBP4.45□□□□□ -1.7
CDKN3-206ENST00000541304 CLUHP3Q96NS8 147 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 RNF2Q99496 336 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 WDR61Q9GZS3 305 aaKnown RBP4.45□□□□□ -1.7
CDKN3-206ENST00000541304 FBXL17Q9UF56 701 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 SLC45A2Q9UMX9 530 aa4.45□□□□□ -1.7
CDKN3-206ENST00000541304 LSM4Q9Y4Z0 139 aaKnown RBP4.45□□□□□ -1.7
CDKN3-206ENST00000541304 CSPG4Q6UVK1 2322 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms