RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 NFYAP23511 347 aaPredicted RBP3.18□□□□□ -1.9
SNHG1-214ENST00000540865 NPPCP23582 126 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 DTYMKP23919 212 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 TALDO1P37837 337 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 P2RY1P47900 373 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 EIF2B2P49770 351 aaKnown RBP3.18□□□□□ -1.9
SNHG1-214ENST00000540865 KRTAP10-1P60331 282 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 DLK1P80370 383 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 DHRS2Q13268 280 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 INSL4Q14641 139 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 CLINT1Q14677 625 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 RAB11BQ15907 218 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 HSD17B12Q53GQ0 312 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 PSMG4Q5JS54 123 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 ZNF600Q6ZNG1 722 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 SSX7Q7RTT5 188 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 CADM3Q8N126 398 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 RNF125Q96EQ8 232 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 UPK3BQ9BT76 320 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 PLGRKTQ9HBL7 147 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 TAS2R8Q9NYW2 309 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 RAB22AQ9UL26 194 aa3.18□□□□□ -1.9
SNHG1-214ENST00000540865 YTHDF2Q9Y5A9 579 aaKnown RBP3.18□□□□□ -1.9
SNHG1-214ENST00000540865 IGHV3OR16-12A0A075B7B8 117 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 IGKV1D-8A0A087WSZ0 117 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 LYRM9A8MSI8 78 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 TOMM40O96008 361 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 MT-CO2P00403 227 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 HBE1P02100 147 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 UCHL1P09936 223 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 HLA-DRB4P13762 266 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 HIST1H1DP16402 221 aaKnown RBP3.17□□□□□ -1.9
SNHG1-214ENST00000540865 GADD45AP24522 165 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 CRYBB3P26998 211 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 NKX2-1P43699 371 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-214ENST00000540865 NPBWR1P48145 328 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 AP2S1P53680 142 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-214ENST00000540865 ERVFC1-1P60608 527 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 SNRPD3P62318 126 aaKnown RBP3.17□□□□□ -1.9
SNHG1-214ENST00000540865 GNGT1P63211 74 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 ST3GAL4Q11206 333 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 C2orf76Q3KRA6 126 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 CNIH2Q6PI25 160 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 Q6ZRN7 208 aaPredicted RBP3.17□□□□□ -1.9
SNHG1-214ENST00000540865 CCDC197Q8NCU1 140 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 DMBX1Q8NFW5 382 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 OR10R2Q8NGX6 335 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 DEFB104AQ8WTQ1 72 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 FAM3DQ96BQ1 224 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 MOB3AQ96BX8 217 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 URB1-AS1Q96HZ7 61 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 NARS2Q96I59 477 aaKnown RBP3.17□□□□□ -1.9
SNHG1-214ENST00000540865 TMEM56Q96MV1 263 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 METTL26Q96S19 204 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 HINT2Q9BX68 163 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 MAGT1Q9H0U3 335 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 COMMD9Q9P000 198 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 GOLT1BQ9Y3E0 138 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 OR51B2Q9Y5P1 312 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 HLA-DRB4X5D2U9 266 aa3.17□□□□□ -1.9
SNHG1-214ENST00000540865 A0A075B6Q4 140 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 A0A1B0GU03 582 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 GAGE10A6NGK3 116 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 FAM90A26D6RGX4 464 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 F5H768 121 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 SULT1C2O00338 296 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 TNFSF12O43508 249 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 TMEM50AO95807 157 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 OXTP01178 125 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 FUSP35637 526 aaKnown RBP eCLIP3.16□□□□□ -1.9
SNHG1-214ENST00000540865 WNT4P56705 351 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 LINC00315P59091 139 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 ARPC4P59998 168 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 KRTAP10-7P60409 375 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-214ENST00000540865 ERVK-16P61578 105 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 RPP30P78346 268 aaKnown RBP3.16□□□□□ -1.9
SNHG1-214ENST00000540865 CATR1Q13166 79 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 ARL6IP1Q15041 203 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 RRN3P1Q2M238 152 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 C1orf146Q5VVC0 180 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 TPRA1Q86W33 373 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 C1orf158Q8N1D5 194 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 Q8N9P0 234 aaPredicted RBP3.16□□□□□ -1.9
SNHG1-214ENST00000540865 ZNF114Q8NC26 417 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 GFI1Q99684 422 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 C7orf50Q9BRJ6 194 aaKnown RBP3.16□□□□□ -1.9
SNHG1-214ENST00000540865 TMEM70Q9BUB7 260 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 CCL28Q9NRJ3 127 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 PPP1R14DQ9NXH3 145 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 ZNF586Q9NXT0 402 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 FKBP11Q9NYL4 201 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 PRNDQ9UKY0 176 aa3.16□□□□□ -1.9
SNHG1-214ENST00000540865 CBY3A6NI87 242 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 MYL12BO14950 172 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 SCGB2A1O75556 95 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 SNAPC5O75971 98 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 IGHV3-48P01763 117 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 ATP5G1P05496 136 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 DEFB130BP0DP73 79 aa3.15□□□□□ -1.91
SNHG1-214ENST00000540865 DEFB130AP0DP74 79 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms