RNA–Protein interactions for RNA: ENST00000540783.5

RAPGEF4-215, Transcript of Rap guanine nucleotide exchange factor 4, human

TSL 2 BASIC

Gene RAPGEF4, Length 3,974 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAPGEF4-215	ENST00000540783	CCL13	Q99616	98 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MBNL3	Q9NUK0	354 aa	Known RBP	4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LRRK2	Q5S007	2527 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TNC	P24821	2201 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PPIAL4C	A0A0B4J2A2	164 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TMEM178B	H3BS89	294 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PPIAL4G	P0DN37	164 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	OPRK1	P41145	380 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GATA4	P43694	442 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	UBE2V1	Q13404	147 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RPL39P5	Q59GN2	51 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	STPG3	Q8N7X2	389 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	OR4C5	Q8NGB2	326 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		Q8TCH9	128 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	LEAP2	Q969E1	77 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RPE	Q96AT9	228 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	C1orf159	Q96HA4	380 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	KCNS1	Q96KK3	526 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	HSD17B10	Q99714	261 aa	Known RBP	4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	C1RL	Q9NZP8	487 aa		4.62	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ANKHD1	Q8IWZ3	2542 aa	Known RBP	4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		A0A1W2PN81	502 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SH2D7	A6NKC9	451 aa	Predicted RBP	4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		M0R1X1	148 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PROP1	O75360	226 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	IGFBP2	P18065	325 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CD24	P25063	80 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PMCHL1	Q16048	86 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TNXA	Q16473	311 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	UTF1	Q5T230	341 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	KIR3DL3	Q8N743	410 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZC2HC1A	Q96GY0	325 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	COQ2	Q96H96	371 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SSBP4	Q9BWG4	385 aa	Predicted RBP	4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CDC42EP3	Q9UKI2	254 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ABCA1	O95477	2261 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	DSP	P15924	2871 aa	Known RBP	4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SLA	Q13239	276 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MLANA	Q16655	118 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	STUM	Q69YW2	141 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TCTEX1D1	Q8N7M0	179 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZNF738	Q8NE65	137 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SGK494	Q96LW2	274 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZNF714	Q96N38	554 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MCRIP2	Q9BUT9	160 aa	Known RBP	4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GNB1L	Q9BYB4	327 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	C7orf69	Q9H7B7	122 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SLC35D1	Q9NTN3	355 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CLEC5A	Q9NY25	188 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	BET1L	Q9NYM9	111 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	COX11	Q9Y6N1	276 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ARFGEF3	Q5TH69	2177 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GCN1	Q92616	2671 aa	Known RBP	4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	OR7C2	O60412	319 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	APCS	P02743	223 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	IGLL1	P15814	213 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CAMP	P49913	170 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ERVK11-1	P61568	191 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RPL8	P62917	257 aa	Known RBP	4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CX3CL1	P78423	397 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	EIF4EBP1	Q13541	118 aa	Predicted RBP	4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	FBLN7	Q53RD9	439 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	EBLN2	Q6P2I7	272 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RNASEK	Q6P5S7	137 aa	Known RBP	4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ARL6IP6	Q8N6S5	226 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZNF439	Q8NDP4	499 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ORAOV1	Q8WV07	137 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ENY2	Q9NPA8	101 aa		4.61	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PKDREJ	Q9NTG1	2253 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SRRM5	B3KS81	715 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RNF223	E7ERA6	249 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	GPR12	P47775	334 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	HES1	Q14469	280 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TIGIT	Q495A1	244 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SAPCD1	Q5SSQ6	148 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ACP7	Q6ZNF0	438 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SLC24A4	Q8NFF2	622 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ADTRP	Q96IZ2	230 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	BPESC1	Q9GZL8	116 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CAD	P27708	2225 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	IGHV3OR15-7	A0A075B7D8	119 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		H0Y8G0	127 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	F2RL2	O00254	374 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	HSBP1	O75506	76 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MSMB	P08118	114 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	CFHR2	P36980	270 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RHOB	P62745	196 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZNF146	Q15072	292 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	PRR27	Q6MZM9	219 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	SPATA12	Q7Z6I5	190 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	KLHDC1	Q8N7A1	406 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	ZBTB34	Q8NCN2	500 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	VPS25	Q9BRG1	176 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	TECR	Q9NZ01	308 aa	Known RBP	4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783		M0R2Z0	102 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	RTL8B	Q17RB0	113 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	MPV17L2	Q567V2	206 aa		4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	IBA57	Q5T440	356 aa	Known RBP	4.6	□□□□□ -1.67
RAPGEF4-215	ENST00000540783	C10orf105	Q8TEF2	133 aa		4.6	□□□□□ -1.67

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